| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1102 |
|---|
| Symbol | |
|---|
| ID | 4205335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1246967 |
|---|
| End bp | 1247524 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642565659 |
|---|
| Product | phosphatase |
|---|
| Protein accession | YP_698425 |
|---|
| Protein GI | 110802845 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0240643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTA TTCAAAATAT AGATATAAAT ATACTTTACT TTATACAAAA TAATATACAA
AATAAGTTTC TTAATCCAAT AATGATTTTC TTAACTTCAT TAGGTAATTT AGGCTTTATA
TGGATTGCCT TAAGTATCTT ACTTATAATA TCAAAAAAAT ATAGAAAAAT AGGATTATTA
ACCTTAGCTG TTTTAATTGT TAACACCTTG CTTGGTGAAG GAATTCTTAA ACATATTATA
GAAAGATCTA GACCCTTTGC AACATATGAA AGCTTACATA TAATGATACC TAAACCAAGT
AGTTACTCTA TGCCCTCTGG TCATACTTCT GCATCCTTTG CATCAGCATT TATGTTAGCT
TATTATTTTA AAAATATAAG AATATATATC TATTCCTTAG CTTCTTTAAT AGCTTTTTCT
AGATTATACT TGCTTGTTCA CTATCCAAGT GATGTATTAA CAGGTATTTT ACTAGGATAT
CTAAGCTACT TAATAGTTAT AAAATCCTAT GAACTTATAC AAAAATCTAA AATAAAAGAT
CAAAGAAAGT CTTTTTAG
|
|---|
| Protein sequence | MHFIQNIDIN ILYFIQNNIQ NKFLNPIMIF LTSLGNLGFI WIALSILLII SKKYRKIGLL
TLAVLIVNTL LGEGILKHII ERSRPFATYE SLHIMIPKPS SYSMPSGHTS ASFASAFMLA
YYFKNIRIYI YSLASLIAFS RLYLLVHYPS DVLTGILLGY LSYLIVIKSY ELIQKSKIKD
QRKSF
|
|---|
| |