| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1063 |
|---|
| Symbol | |
|---|
| ID | 4204404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1211155 |
|---|
| End bp | 1212066 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565619 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_698385 |
|---|
| Protein GI | 110801594 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AAGAACTATT AGAAGAATGT ACTCTTTGCA CTAGAAACTG CAAAGTTAAT
AGATTTAAAT CTCTTGGGGT ATGTAAGGCT AGTGAAAAAG TTAAAGTAGC TAGAGCAGAA
CTTCATCCTT GGGAAGAACC TCCTATTTCC TTTAAGAATG GATCTGGAAC AGTATTTTTT
TCTCATTGTA ATTTAAAATG TGTTTTTTGC CAAAACCATG AAATAAGTCA AGATTTTAAA
GGACTTGAAA TATCAATTGA AAGGTTAGCA GAAATCTTTT TAGAGCTTCA AGAAAAGGGA
GCTGAAAATA TAAACTTAGT TACTCCAACA CATTATGCAG TTCAAATAAT AGAGGCTTTA
AAAACAGCAA AAGAAAAAGG ATTAAATATT CCTATTCTCT ATAATACTAA TGGATATGAT
AGTTTAGAAA CAATAAAGTT ATTAGATGGT TACATAGATG TGTATCTTCC TGATTTTAAA
TATTTTAAGG ATGATTATGC ACTTAAATAT TCAAAGATAA AAAATTATAA GGACAATTTA
ATTCCAGTAT TAGATGAAAT GTTTAGGCAG GTAGGTTCTC CAAAATTTTC AGAGGAAGGT
AAACTTTTAA AGGGTATGAT AATTAGACAT TTAATGCTTC CAGGTCTTTT ATTTGATTCA
AAGAAAGTTA TAGACACTAT ATTTTCTAAA TTTGGAGATG ATGTTTATAT AAGCATTATG
AATCAATATA CTCCTATGAA TAAGTCTTGT GATTATCCTG AAATAAATAA GCCTTTAAAC
CCTAAACATT ATGAATCTCT TATAGATTAT GCAGCATCTT CAGGAGTTAA AAATGCATTT
ATACAAGAAA GTGGAACTAA CTCAAAGGCC TATGTTCCCT CATTTAAATA TGAAGGAGTT
ATGGAAAAAT AA
|
|---|
| Protein sequence | MKNKELLEEC TLCTRNCKVN RFKSLGVCKA SEKVKVARAE LHPWEEPPIS FKNGSGTVFF
SHCNLKCVFC QNHEISQDFK GLEISIERLA EIFLELQEKG AENINLVTPT HYAVQIIEAL
KTAKEKGLNI PILYNTNGYD SLETIKLLDG YIDVYLPDFK YFKDDYALKY SKIKNYKDNL
IPVLDEMFRQ VGSPKFSEEG KLLKGMIIRH LMLPGLLFDS KKVIDTIFSK FGDDVYISIM
NQYTPMNKSC DYPEINKPLN PKHYESLIDY AASSGVKNAF IQESGTNSKA YVPSFKYEGV
MEK
|
|---|
| |