| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1058 |
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| Symbol | sdhA |
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| ID | 4205575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1206424 |
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| End bp | 1207302 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642565614 |
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| Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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| Protein accession | YP_698380 |
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| Protein GI | 110802811 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTG CAAAAACTGG AGAAGAACTT TTAGATATAT GTAAAGAAGA AGGGATTAAG
CTTAGTGAAT ATGCCTTAAG ATGTGAGATG CAAAGTAAAA ATATTTCAAA AGAAGAAGTT
TTAGAGAAAC TTTCAAAAAC TTTAGAGGTT ATGAAAAAAT CATCATCAAA AGGAAGAGAA
GAAGAAGTAT ATTCACTTAG TGGATTAATA GGAGGAGATG CTTTTAAGCT TCAAAAGTAT
TTAGAATCTG GAAAATCTTT TACAGGTAAT GGAGCTATAT TAGCTATGGC TATGGCTATT
TCTTCATCTG AAGTAAATGC TTCTATGGGA AAAATAATTG CTTGCCCAAC AGCGGGCTCT
TGTGGAATTC TTCCTGCGGT AATGTTAACA GCTAAGGAAA GATTAAATCT TCAAGATGAA
GATTTATTAT ATGGGCTTTT AGCAGCATCA GCTATTGGGC TTATAATTGG AAAAAATGCT
ACATTTTCAG GAGCAGAAGG TGGATGTCAA GCAGAATGTG GCTCAGCATC TGCTATGGCA
GCTGGTGGCC TTGTAGAACT TATGGGAGGA ACACCAGAAA TGTCATTAAA TGCTGCTGCA
ATAGTAATAA AGAATATATT AGGTCTTGTT TGCGATCCTG TTGCAGGTCT TGTTGAAATT
CCTTGTGCTA AAAGAAATGC TTCAGGTGCC GTAAATGCTA TATGTGCAGC AGATCTTGTA
ATGGCTGGTA TAGAATCAAA AATACCTTTT GATGATACAG TAAGTGCTAT GGCTCAAGTT
GGAAAAGCTC TTCCAGAGAT CTTAAGAGAA ACAGCACTTG GAGGAGTAGC TATTACAAAA
ACAGGTCTTA TGTTGAATAA AAAAGTATTC GGTAAGTAA
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| Protein sequence | MRVAKTGEEL LDICKEEGIK LSEYALRCEM QSKNISKEEV LEKLSKTLEV MKKSSSKGRE
EEVYSLSGLI GGDAFKLQKY LESGKSFTGN GAILAMAMAI SSSEVNASMG KIIACPTAGS
CGILPAVMLT AKERLNLQDE DLLYGLLAAS AIGLIIGKNA TFSGAEGGCQ AECGSASAMA
AGGLVELMGG TPEMSLNAAA IVIKNILGLV CDPVAGLVEI PCAKRNASGA VNAICAADLV
MAGIESKIPF DDTVSAMAQV GKALPEILRE TALGGVAITK TGLMLNKKVF GK
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