| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1055 |
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| Symbol | |
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| ID | 4204502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1202750 |
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| End bp | 1204426 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 22% |
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| IMG OID | 642565611 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | YP_698377 |
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| Protein GI | 110803182 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.952288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TTAATTTTGA GGAAATAATA GAGTCATGTC CTATGGATTA TATTTATGGG
AAACTAACAG GTGATGATTA TTTTGATTTA TTTGTGCTTA AGTCTAGCAT AAAAGAATTT
AATTTAAAAT TGTTAAGCGA AGTACTAGGG TATAATATAG ATTTTAAAAT TATATTTAGC
AAAAACTATA ATTTTATAGA AGAATATTGC AAAGGTTTAA ATGAGAGTTT TAGTTTGAAA
TTAATTGATA ATGATTATGT GATTATTTGG TTTAATAGAT ACTTATTTAA AAAATATAAT
AAATTAAAAC TTGGATTTAA GAAAGAAAAA GAAATATTAG ATTTATTTTT AGATTCTTTA
AAAGAATATA TAACTTTTAA TCATATTGAC AGAAAATATG TAATAGAAAA AACTAATAAA
GATATATTTT TTGATGATAA AAATAATGAA TTTAAAGATA TAAGTGGAAT AGCAGAGAAT
ATATTCTATA AAAGAGCTAT AGAATATGGA GTTAATAAAA ATGATGAGAT GTTTTTTGAA
ATTTTCAATT ACTTAGATGA TGTTGTAATT ATAAAAGAAG GAGAAAAAAC TATTTATGTA
AATAATGCTT TTGAAAAATT GTATGGTTTA AATTGCAAAG ATTTATATAG AGAAAATAGT
ATGATTGTAA AATTAGATAG AATCCATCCT AAGGATAGAT ATAAGTTTAA CAATATAGAC
TTTAAAAAAT TTTTTATGGC AGAAGCAAGG ATTATTAGAG CAGACAATGA AGTTAGAAAT
GTTTTATTTA GAGCAAATTC AATAAAAAAT GAAAATGGAG AATCTATAAG GAGAATTATA
ATAATAAATG ATATTACAAA TAATATAGAA AAAGGAAATG AAATGGAGAA ACTTAGAATG
GAGTTTTTTG CTAATATATC TCATGAATTT AAAACACCTG TAAATTTAAT ATACAGTGCA
CTTCAACTTT TAGAATTAAA ATTAAAAAAT AATAGAGATG GAGATATTTA TATTAATTAT
ATTAAAATGG CTAAGCAGAA TGTTTTTAGA CTATTAAAGC TAATAAATAA TTTAATAGAT
AGTACTAAGT TAGAAGCTGG CTTTTTTAAT GTTAATATTA AAAATCATGA TATAGTAAGT
TGTGTTGAAG ATATAACAAT GTCTATATGT AATTTTGCTG AAAAAAATAA AATATCTATA
ACTTTTGATA CGGAAGAAGA AGAAAAAATA ATTGCTTTTG ATTTCAATCA TTTAGAAAGG
ATACTGTTAA ATGTTTTATC TAATGCTATA AAATTTAACA GGGAAAATGG CAATATAGAT
GTCTATATTA GTTTTGATGA TAAGTATGCA AATATAAGTA TTAAAGACAC GGGTATAGGA
ATACAAAAGG ATAAAATAGA TTTACTTTTT CATAGATTTA AAAAAATAAA TAATAGATTA
ACCAAGGTTA ATGAGGGAAG TGGAATAGGG CTTTACATAG CTAAGGAACT TGTAAAAATT
AATGGGGGTG ACATGATAGT TAATAGTGAA CTTGGAGAAG GAACTGAATT TATAATAAAA
CTTCCAATTA AAAAAAATGA AAGTAAAGTT TTAGATGAGA TAGCCTTAAC ATCCTGTGAA
ATAGAAAATA GAGAAGAACT TTACAAAGTG GAGTTATCAG ATATTTATAG CATTTAG
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| Protein sequence | MKDFNFEEII ESCPMDYIYG KLTGDDYFDL FVLKSSIKEF NLKLLSEVLG YNIDFKIIFS
KNYNFIEEYC KGLNESFSLK LIDNDYVIIW FNRYLFKKYN KLKLGFKKEK EILDLFLDSL
KEYITFNHID RKYVIEKTNK DIFFDDKNNE FKDISGIAEN IFYKRAIEYG VNKNDEMFFE
IFNYLDDVVI IKEGEKTIYV NNAFEKLYGL NCKDLYRENS MIVKLDRIHP KDRYKFNNID
FKKFFMAEAR IIRADNEVRN VLFRANSIKN ENGESIRRII IINDITNNIE KGNEMEKLRM
EFFANISHEF KTPVNLIYSA LQLLELKLKN NRDGDIYINY IKMAKQNVFR LLKLINNLID
STKLEAGFFN VNIKNHDIVS CVEDITMSIC NFAEKNKISI TFDTEEEEKI IAFDFNHLER
ILLNVLSNAI KFNRENGNID VYISFDDKYA NISIKDTGIG IQKDKIDLLF HRFKKINNRL
TKVNEGSGIG LYIAKELVKI NGGDMIVNSE LGEGTEFIIK LPIKKNESKV LDEIALTSCE
IENREELYKV ELSDIYSI
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