| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1052 |
|---|
| Symbol | |
|---|
| ID | 4205060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1198629 |
|---|
| End bp | 1199096 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642565608 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698374 |
|---|
| Protein GI | 110801702 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.301545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATT GGCAAATATC AGCAGAGATA GGTAACACAA ATTTAATAGA TATATTCTTT
GATTTAGGAG TAGCAATTGT TGGCCCTGGA GACAAAGGAG ATTATTTTGA CAATAAAGAA
GAGTACGATA TATTAGGCAA AGAGGGAATA GTTATAAAGA GATTTGCTGA AGAAGTTAAG
GTAGGAGATG TACTTATTTT AAAACAGATA AATTCAAAGG ATGGAAGCTT TACTATTGTA
GCAGCTGGTA AAGTAACAAG TCCATATAGA TTTGAACCTG TATTTAACAA AGTAGGACTA
GATGAATTGC CTATGCAGCA CTGTAGAAGG GTAAAATGGT ATATTCCTAC TGATGGCTTA
GTAATAGATA AAGAAGGGTT AAGTATTGGA TTACAAAAGC TTAAGGATGA TAGCCCACTA
AAAATAAAAG CTCAAGAATT TATGAATGAA TTAAAGGATG AAAATTAA
|
|---|
| Protein sequence | MNYWQISAEI GNTNLIDIFF DLGVAIVGPG DKGDYFDNKE EYDILGKEGI VIKRFAEEVK
VGDVLILKQI NSKDGSFTIV AAGKVTSPYR FEPVFNKVGL DELPMQHCRR VKWYIPTDGL
VIDKEGLSIG LQKLKDDSPL KIKAQEFMNE LKDEN
|
|---|
| |