| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1034 |
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| Symbol | |
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| ID | 4205766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1175286 |
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| End bp | 1176908 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565591 |
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| Product | amino acid permease family protein |
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| Protein accession | YP_698357 |
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| Protein GI | 110802934 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.696759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCAA AAGAAAAAAG CAAATTAACC CTAACAGCAT TAATTCTTAT GATATTTACA
TCTGTTTATG GCTTTACTAA TATGCCAAGA ACCTTTTATT TAATGGGTTA TAGTGGAATA
ATATGGTATA TAATGTCAGC TATTTTATTT TTTATTCCTT ATGCTTTTAT GATGGCTGAA
TATGGTGCTG CCTTTAGAAA AGAAAAAGGT GGTATATATT CTTGGATGGC TAAATCAGTA
AATCCTAAAT TTGCTTTTAT AGTAACATTT ATGTGGTTTT CTTCAAATCT AATATGGATG
GTATCTGTAT CATCTTCTAT ATGGATTCCT TTATCTAATG TATTTTTTGG TAAAGATACT
ACTTCTACTT GGAATATATT CGGTTTAACA GGTCCTCGTG CAATGTCTGT ATTAGCTATA
ATATTATTAA TAATAATAAC ATTTATTTCT TCTAAAGGAT TAAATAAAAT TTCAAAAATT
ACATCCATAG GAGGAACAGT TGTTGCCTTG TCTAATGTAG TTTTAATTCT TGGTGGTTTT
TTCGTACTAG CAAGCAATGG TTTTAAAACT GCTCAAGGCT TTAACATGGA ACAGTTTATA
CATTCTCCAA ATCCCGCATA TCAATCCCCT TTAGGCGTAC TTGGCTTCGT TGTATTTGCA
ATATTTGCTT ATGGTGGGAT AGAAGTAGTT GGTGGATTAG TTGACCAAAC TGAAAACCCT
AAAAAGAATT TTCCTAAAGG AATAAAAATT TCTGCCTTTG TAATTGTTAT TGGTTATGCA
ATAGGAATTT TATGTATTGG TTTCTTTGTT AATTGGAATA GGGATTTAAC TGGTTCTGAT
GTAAATATGG CAAATATAGC ATATATTATA GTAAATTATC TTGGTTATTA CATAGGAGAA
GCAATTGGCT TAAGTGCTAA TGCTTGTACA ATATTAGGTA ACTTCTTTGC TAGATTTATA
GGACTTTCAA TGTTTTTAGC ACTTATAGGT GCCTTCTTCG CTTTAAGTTA CTCTCCTTTA
AAACAATTAA TAGAAGGTAC TCCTAAGGAT ATTTGGCCTG AAAAATGGAC AAGATTAAAC
AAAGAAAATA TGCCAGCTAC AGCTATGTGG ATTCAATGTA TAACAGTAAT TATATTTGTT
TTATGTTGCT CAATGGGTGG CGAAGATTCA TCTAAATTCT TTAACTATTT AATACTTATG
GGGAATGTAG CCATGACATT ACCTTATATG TTTTTATCCT TTGCTTTTTC ATTCTTCAAG
AAGAAAAAAG AAATTGTAAA ACCTTTTGAA GTATATAAAA ATTATAAGAG CGCTTTAGTT
TGGTCTATCA TAGTAACATT AACAGTTGGT TTTGCTAATA TATTTACAAT AATACAACCT
CTTACTTCAG AAAATAAAGA TTATGTTGCT GTAATCTTCC AAATTTCTGG TCCTATTATA
TTTGGATTCT TAGCATGGTT AATATATAAA AGATATGAAA ACAATGTACT AAAAAAACAA
ATTTCAAATA TTGATAATAA AATTGATACA GAACTTGAAA AAATAGAAAA AGCTGAAGAA
GAAGTTACAA GTGAAACAAT AGGAGTAATA GATATAGAAG TTCATGATGA TGATTCTAAA
TAA
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| Protein sequence | MESKEKSKLT LTALILMIFT SVYGFTNMPR TFYLMGYSGI IWYIMSAILF FIPYAFMMAE
YGAAFRKEKG GIYSWMAKSV NPKFAFIVTF MWFSSNLIWM VSVSSSIWIP LSNVFFGKDT
TSTWNIFGLT GPRAMSVLAI ILLIIITFIS SKGLNKISKI TSIGGTVVAL SNVVLILGGF
FVLASNGFKT AQGFNMEQFI HSPNPAYQSP LGVLGFVVFA IFAYGGIEVV GGLVDQTENP
KKNFPKGIKI SAFVIVIGYA IGILCIGFFV NWNRDLTGSD VNMANIAYII VNYLGYYIGE
AIGLSANACT ILGNFFARFI GLSMFLALIG AFFALSYSPL KQLIEGTPKD IWPEKWTRLN
KENMPATAMW IQCITVIIFV LCCSMGGEDS SKFFNYLILM GNVAMTLPYM FLSFAFSFFK
KKKEIVKPFE VYKNYKSALV WSIIVTLTVG FANIFTIIQP LTSENKDYVA VIFQISGPII
FGFLAWLIYK RYENNVLKKQ ISNIDNKIDT ELEKIEKAEE EVTSETIGVI DIEVHDDDSK
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