Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1033 |
Symbol | |
ID | 4206464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1174223 |
End bp | 1175182 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642565590 |
Product | hypothetical protein |
Protein accession | YP_698356 |
Protein GI | 110802218 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0768562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATATA AAAGATATTT TATATCACTT GTACTTATTT TAGCTATGGT AAGTATTGCA GAAATTACAG GGGAAAGAGA GATAATATTT CCAGAGGTGG CCGCTTTAGT TGTTGGATCT TGGGTTTTAG AAAAGCAACC TTGGAAGGTT AGTAAATTAG GATTAGTATG TCTTATGACA CTATGTTCTA TAGTAGGGGT ACTTATTGTA AGATATGTTA ACTTAGGATT AACTATTGAA GTTTTAATAG GATTAGTTTT TACTGGGTTT ATATTAAAGC TATCAAAAAC AACTCTTGTT CCAATTATTT CAGCTTGTAT TTTACCTATT GTACTTAGAA CTGAGACTTG GGTTTATTCA ATATCCGTAT TTATACTTAC TATACTTATA GTCTCAATTA AGTATTTTAT AGAAGATTAT GGAGTAAGTG AAGAGGTAAA AGAAGAATTT AAAGAAGAGA TTGCTAAACT TGAAAGAAAT ACTTCACTTA GAAAAAAAGA ATTTATTAGA TTATTTAAGA TATTTATTAC TGTGGGTATT TTAACATATT TTTCTGTTAA ATTTAATATT ACTTTATTAA TAGCACCACC TTTAATAGTT GCTTTTATAG AACTTACAAA TGAACATTGT AAATTTAGGC AGCGTTCAAA AAGTTTATTA TTCTTATTTA TTGTTGTAGC TATTTTAGGA TTTATATTTA GAATTGGATT TAACGAATAT TTAGGACTGC CTTTATGGCT TTGTACTATT TTTCTATTAA TTAGTTTATT TATATGTATT GAAATATTTA ATATGTACTT CCCACCAGTT GCAGCAATTG CTGTTTTGCC AATGCTATTA ACTAGTAAAC AAGTAATGTT TTATCCATTT CAAATTGCTA TAGGATGCTT TATATTTATA ACTATTGCTA TGATTTTTTT TAGAGAAGAA AAATGTATTG TTGACACTTT TAAGAATTAA
|
Protein sequence | MKYKRYFISL VLILAMVSIA EITGEREIIF PEVAALVVGS WVLEKQPWKV SKLGLVCLMT LCSIVGVLIV RYVNLGLTIE VLIGLVFTGF ILKLSKTTLV PIISACILPI VLRTETWVYS ISVFILTILI VSIKYFIEDY GVSEEVKEEF KEEIAKLERN TSLRKKEFIR LFKIFITVGI LTYFSVKFNI TLLIAPPLIV AFIELTNEHC KFRQRSKSLL FLFIVVAILG FIFRIGFNEY LGLPLWLCTI FLLISLFICI EIFNMYFPPV AAIAVLPMLL TSKQVMFYPF QIAIGCFIFI TIAMIFFREE KCIVDTFKN
|
| |