| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1026 |
|---|
| Symbol | |
|---|
| ID | 4205674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1168241 |
|---|
| End bp | 1168777 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565583 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_698349 |
|---|
| Protein GI | 110802621 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.04413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATATG ATTTTAAAGT TAAGGATATT GAAGGAAATG AGGTTTCTTT AGGGGAGTAT
AAAGGAAAGG TTCTTTTAAT AGTTAATACT GCAACAGGAT GTGGATTTAC TCCTCAATAT
GAAGGATTAG AAATGCTTTA TAAAAAATAC CATGATAAAG GATTTGAAAT ATTGGATTTT
CCATGTAATC AGTTCTTTGA GCAAGCACCA GGAAGTAATG AAGAAATAGC TGGATTTTGT
AAGTTAAATT ATGGAACTAC ATTTAAGACC TTTGCAAAAG TAGAGGTTAA TGGAGAAAAT
GCTTGTGAAT TATACAAATT TTTAAAAAAA GAAGCTCCAA TGGCAAAGGA AGATGAAACA
TCTTTAGGAT TTTATGATAA ATTAAAAGGC TTAGGATTTA CTACAGAAGG AGAAGAAATA
AAGTGGAATT TCACTAAGTT TTTAATAGAT AAAAATGGTG AAGTTATTGC TAGATTTGCA
CCCACATTTG AACCTGAAAA GTTAGATGAA TTAATAGAAG AATTATTAGA AGAATAA
|
|---|
| Protein sequence | MLYDFKVKDI EGNEVSLGEY KGKVLLIVNT ATGCGFTPQY EGLEMLYKKY HDKGFEILDF
PCNQFFEQAP GSNEEIAGFC KLNYGTTFKT FAKVEVNGEN ACELYKFLKK EAPMAKEDET
SLGFYDKLKG LGFTTEGEEI KWNFTKFLID KNGEVIARFA PTFEPEKLDE LIEELLEE
|
|---|
| |