Gene CPR_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1013 
Symbol 
ID4204678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1154883 
End bp1155557 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content23% 
IMG OID642565570 
Producthypothetical protein 
Protein accessionYP_698336 
Protein GI110802330 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000440663 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATT TAATTTATTC ATTAATAGCA GTAATAATTT TAACAGTAGG TCTAAACAAC 
ATATTTAAAA AGCAATCTAA ATATTTTTAT ATGCTGGCTA TTTTAATATC AGTAGTAGTT 
ACATCATATG AGATTTTTGA AATATGGACA GGCTTTAAAT TAGAAGGAAT TATATTTGTT 
TTAGAAAGAA GCTTTATGAA AGGCTTTGTA TCAACAGCAT TATTTATTTT AGTAATGTTT 
GCAGGAGCTT TAAGTAAGAA ATGGGGAATT ACTAAAAAAC TTTTAAGAGT TAGAGCAGAA 
ATGGCAATTT TAGCATCTAT ACTTATATTA CCTCATTTGA CAATCTATAC TTATAAGTTC 
TTAGTAAGAT TATTTAGTGG AAAGCCATTA AGCATTTTAT ACATATCTTT TATAATAGTA 
GGATTAATAG CATTTATAAT AATGATACCT CTATTTATAA CATCATTTAA GAAAGTAAGA 
GTTACTATGT CACCAAGTAA ATGGAAAATG GTTCAAAGAT GGGCATATCC TTTTTATTTT 
CTAGTGTATT TACATATAAT ATTAATCTTA TTTAATAAGA AAGTTTTTAA TTTAAATGCT 
GTAATATTAT ATACAGTTAT ATTCTTAGGA TATTTTATTT TAAAAATATG TAATAACAAA 
AAAAATATTA AATAA
 
Protein sequence
MQYLIYSLIA VIILTVGLNN IFKKQSKYFY MLAILISVVV TSYEIFEIWT GFKLEGIIFV 
LERSFMKGFV STALFILVMF AGALSKKWGI TKKLLRVRAE MAILASILIL PHLTIYTYKF 
LVRLFSGKPL SILYISFIIV GLIAFIIMIP LFITSFKKVR VTMSPSKWKM VQRWAYPFYF 
LVYLHIILIL FNKKVFNLNA VILYTVIFLG YFILKICNNK KNIK