Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1011 |
Symbol | dhaT |
ID | 4206140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1151232 |
End bp | 1152389 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642565568 |
Product | 1,3-propanediol dehydrogenase |
Protein accession | YP_698334 |
Protein GI | 110803773 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000128902 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATGT ACGATTATTT AGTACCAAGT GTAAACTTTA TGGGAGCTAA CTCAATATCA GTAGTTGGTG AAAGATGTAA AATATTAGGT GGAAAGAAAG CTTTAATAGT TACAGATAAA TTCTTAAGAG GATTAAAAGG GGGAGCAGTT GAATTAACTG AAAAATACCT AAAAGAAGCA GGAATCGAAG TTGCTTATTA TGATGGAGTT GAACCAAATC CAAAAGATAC AAATGTTAAA GATGGTTTAA AAATATTCAA AGACGAAAAC TGTGATATGA TAGTTACAGT TGGTGGAGGA AGCTCACATG ACTGTGGTAA AGGAATAGGT ATAGCTGCAA CTCACGAAGG AGATCTTTAT GACTATGCTG GAATAGAAAC TTTAACAAAT CCACTTCCTC CAATAGTAGC AGTAAACACT ACAGCTGGAA CTGCAAGTGA AGTAACTAGA CACTGTGTTA TAACAAACAC TAAAACTAAA GTTAAATTCG TTATAGTAAG CTGGAGAAAC TTACCTTTAG TTTCAATCAA TGACCCAATG TTAATGGTTG GAAAACCAGC AGGATTAACA GCTGCAACAG GAATGGACGC TTTAACTCAT GCTGTAGAAG CATATGTATC AAAAGATGCT AACCCTGTAA CAGATGCTGC TGCAATACAA GCTATAAAAT TAATATCAAG CAATTTAAGA CAAGCTGTTG CTTTAGGAGA AAACTTAGTA GCTAGAGAAA ACATGGCTTA CGGTTCATTA TTAGCTGGTA TGGCATTTAA CAATGCTAAC TTAGGATATG TACATGCTAT GGCTCACCAA TTAGGCGGAT TATATGATAT GCCTCACGGA GTAGCTAACG CTATGTTATT ACCACACGTA TGTAAATACA ACTTAATATC TAACCCACAA AAATTTGCTG ATATAGCTGA ATTCATGGGA GAAAACATAG AAGGATTATC AGTAATGGAT GCTGCTCAAA AAGCTATAGA TGCAATGTTC AGATTATCAA CTGATATCGG AATACCAGCA AAATTAAGAG ACATGGGAGT AAAAGAAGAA GACTTCGGAT ACATGGCTGA AATGGCTCTT AAAGATGGTA ATGCATTCAG TAACCCAAGA AAAGGTAACG AAAGAGACAT CGTTGAAATA TTCAAAGCTG CATTCTAA
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Protein sequence | MRMYDYLVPS VNFMGANSIS VVGERCKILG GKKALIVTDK FLRGLKGGAV ELTEKYLKEA GIEVAYYDGV EPNPKDTNVK DGLKIFKDEN CDMIVTVGGG SSHDCGKGIG IAATHEGDLY DYAGIETLTN PLPPIVAVNT TAGTASEVTR HCVITNTKTK VKFVIVSWRN LPLVSINDPM LMVGKPAGLT AATGMDALTH AVEAYVSKDA NPVTDAAAIQ AIKLISSNLR QAVALGENLV ARENMAYGSL LAGMAFNNAN LGYVHAMAHQ LGGLYDMPHG VANAMLLPHV CKYNLISNPQ KFADIAEFMG ENIEGLSVMD AAQKAIDAMF RLSTDIGIPA KLRDMGVKEE DFGYMAEMAL KDGNAFSNPR KGNERDIVEI FKAAF
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