Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1010 |
Symbol | |
ID | 4205314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1150710 |
End bp | 1151138 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642565567 |
Product | hypothetical protein |
Protein accession | YP_698333 |
Protein GI | 110803192 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000124371 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT TAAACGATGT AAAAGAATTA AGCTTAGAAA TAGTTAAAGA AATGGCTAAA GCTGCTGAAG CTAAAGCTTG TGAAATGAAT GTTCCAGTTA TATTTGCAGC AGTTGATGCT GGTGCTAATT TAATGCTTAT GCACAGAATG GAAGATGCAT TTTTAACAAG TATTGATATA GCTATAAACA AAGCTTATAC AGCTGCATGT TTAAAGCAAG GAAGTCATGA AATTGCAGAA TGTGTTCAAC CAGGACAAAG TCTTTATGGT CTTCAATTAA CAAATAATTG TAGAATAGTA CCATTTGGTG GTGGGTTCCC AATTATAGTT GATGGAAAAG TAGTAGGAGC TGTTGGTGTA AGTGGTGGAA CAGTTGAAGA AGACATGGCT ATAGCACAAG CGGCAGTAGA TTGTTTTAAT AATAAGTAA
|
Protein sequence | MKKLNDVKEL SLEIVKEMAK AAEAKACEMN VPVIFAAVDA GANLMLMHRM EDAFLTSIDI AINKAYTAAC LKQGSHEIAE CVQPGQSLYG LQLTNNCRIV PFGGGFPIIV DGKVVGAVGV SGGTVEEDMA IAQAAVDCFN NK
|
| |