| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1004 |
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| Symbol | dhaB |
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| ID | 4206440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1145256 |
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| End bp | 1146920 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642565561 |
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| Product | glycerol dehydratase, alpha subunit |
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| Protein accession | YP_698327 |
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| Protein GI | 110802661 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4909] Propanediol dehydratase, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.872763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATCTA AAAGATTCCA AGTATTATCA GAACGTCCTG TAAACCAAGA TGGACTTATA
GGAGAGTGGG CTGATGAAGG CTTAATAGCT TTAGATAGTC CAAATGATCC AAAATCATCA
ATAAAAATAG AAAATGGAAT AATTACTGAA TTAGACGGTA GATCAAGAGA TGAGTTTGAT
ATGATAGATA AATTTATAGC AGAGTACGCT ATAAATATAG AAGACGCAGA AGCATCTATG
AAACTTTCAT CTAAAGAAAT AGCAAGAAGA TTAGTTGATA TAAATGTTAG TAGAGATGAA
ATAGTAAAAA TCACTACTTC AATAACACCA ATGAAGGCTG TAGAAGTTAT TCAAGAAATG
AACGTTGTTG AAATGATGAT GGCTCTTCAA AAAATGAGAG CAAGAAGAAC ACCTGCTAAC
CAATGTCACG TTACTAACGT AAAAGACAAC CCAGTTCAAA TAGCAGCAGA TGCTGCAGAG
GCTGCTTTAA GAGGATTTGC AGAGCAAGAA ACTACAGTAG GTATAGTTAG ATATGCACCT
TTTAATGCAT TAGCTATCTT AGTAGGTTCA CAAGTAGGTA GAGGAGGAGT TTTAACTCAA
TGTGCAGTTG AGGAAGCTAC TGAACTTGAC CTAGGAATGA GAGGACTTAC AAGTTATGCA
GAAACAGTTT CAGTTTATGG AACAGAATCA GTATTTACAG ATGGAGATGA TACTCCATGG
TCAAAAGCAT TCTTAGCATC AGCTTATGCT TCAAGAGGAC TTAAGATGAG ATTTACATCA
GGTTCAGGTT CAGAAGCATT AATGGGATAC TCAGAAGGTA GATCAATGCT TTACTTAGAA
TCAAGATGTA TATATATAAC TAAGGGAGCT GGAGTTCAAG GATTACAAAA TGGTGCAGTT
AGTTGTATAG GTATGACAGG AGCAGTTCCA TCAGGAATAA GAGCAGTTCT TGGAGAAAAC
TTAATAGCTG CAATGCTTGA TATAGAGGTT GCATCAGCAA ATGACCAAAC ATTCTCACAC
TCAGACATAA GAAGAACAGC AAGAATGTTA ATGCAAATGC TTCCAGGAAC AGACTTCATA
TTCTCAGGAT ATAGTGCAGT TCCAAACTAC GATAACATGT TTGCTGGATC AAACTTTGAT
GCAGAAGACT TTGATGACTA CAACATACTT CAAAGAGACT TAAAAGTTGA CGGTGGATTA
AGACCAGTTA CAGAAGAAGA AACTATAAAG GTTAGAAATA AAGCTGCCAA ATGCATACAA
ATAATCTTTA GAGAATTAGG ATTCCCAGAA GTTACTGATG AAGAAGTAGA AGCTGCAACT
TACTGTCACG GAAGTAAGGA AATGCCAAAC AGAAATGTAG TTGAAGATTT AAAGGCTGCA
GAAGAAATGT TAGAAAGAAG AATAACAGGA TTAGATATAA TAAAAGCTTT AAGCAAAAAT
GGTATGGAAG ATATAGCAAA CAATTTATTA AACATGCTTA AGCAAAGAGT TACTGGAGAT
TATCTTCAAA CTTCAGCAAT CTTAGATAAA GATTTCAATG TTATAAGTGC TGTTAATGAT
GTAAATGACT ATATGGGACC TGGAACAGGA TATAGACTAG ATGGTCAAAG ATGGGAAGAA
ATCAAAAAAG TTCCTACAGT AATGAGACCA GAGGATATAG AGTAG
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| Protein sequence | MKSKRFQVLS ERPVNQDGLI GEWADEGLIA LDSPNDPKSS IKIENGIITE LDGRSRDEFD
MIDKFIAEYA INIEDAEASM KLSSKEIARR LVDINVSRDE IVKITTSITP MKAVEVIQEM
NVVEMMMALQ KMRARRTPAN QCHVTNVKDN PVQIAADAAE AALRGFAEQE TTVGIVRYAP
FNALAILVGS QVGRGGVLTQ CAVEEATELD LGMRGLTSYA ETVSVYGTES VFTDGDDTPW
SKAFLASAYA SRGLKMRFTS GSGSEALMGY SEGRSMLYLE SRCIYITKGA GVQGLQNGAV
SCIGMTGAVP SGIRAVLGEN LIAAMLDIEV ASANDQTFSH SDIRRTARML MQMLPGTDFI
FSGYSAVPNY DNMFAGSNFD AEDFDDYNIL QRDLKVDGGL RPVTEEETIK VRNKAAKCIQ
IIFRELGFPE VTDEEVEAAT YCHGSKEMPN RNVVEDLKAA EEMLERRITG LDIIKALSKN
GMEDIANNLL NMLKQRVTGD YLQTSAILDK DFNVISAVND VNDYMGPGTG YRLDGQRWEE
IKKVPTVMRP EDIE
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