Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1004 |
Symbol | dhaB |
ID | 4206440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1145256 |
End bp | 1146920 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642565561 |
Product | glycerol dehydratase, alpha subunit |
Protein accession | YP_698327 |
Protein GI | 110802661 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4909] Propanediol dehydratase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.872763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATCTA AAAGATTCCA AGTATTATCA GAACGTCCTG TAAACCAAGA TGGACTTATA GGAGAGTGGG CTGATGAAGG CTTAATAGCT TTAGATAGTC CAAATGATCC AAAATCATCA ATAAAAATAG AAAATGGAAT AATTACTGAA TTAGACGGTA GATCAAGAGA TGAGTTTGAT ATGATAGATA AATTTATAGC AGAGTACGCT ATAAATATAG AAGACGCAGA AGCATCTATG AAACTTTCAT CTAAAGAAAT AGCAAGAAGA TTAGTTGATA TAAATGTTAG TAGAGATGAA ATAGTAAAAA TCACTACTTC AATAACACCA ATGAAGGCTG TAGAAGTTAT TCAAGAAATG AACGTTGTTG AAATGATGAT GGCTCTTCAA AAAATGAGAG CAAGAAGAAC ACCTGCTAAC CAATGTCACG TTACTAACGT AAAAGACAAC CCAGTTCAAA TAGCAGCAGA TGCTGCAGAG GCTGCTTTAA GAGGATTTGC AGAGCAAGAA ACTACAGTAG GTATAGTTAG ATATGCACCT TTTAATGCAT TAGCTATCTT AGTAGGTTCA CAAGTAGGTA GAGGAGGAGT TTTAACTCAA TGTGCAGTTG AGGAAGCTAC TGAACTTGAC CTAGGAATGA GAGGACTTAC AAGTTATGCA GAAACAGTTT CAGTTTATGG AACAGAATCA GTATTTACAG ATGGAGATGA TACTCCATGG TCAAAAGCAT TCTTAGCATC AGCTTATGCT TCAAGAGGAC TTAAGATGAG ATTTACATCA GGTTCAGGTT CAGAAGCATT AATGGGATAC TCAGAAGGTA GATCAATGCT TTACTTAGAA TCAAGATGTA TATATATAAC TAAGGGAGCT GGAGTTCAAG GATTACAAAA TGGTGCAGTT AGTTGTATAG GTATGACAGG AGCAGTTCCA TCAGGAATAA GAGCAGTTCT TGGAGAAAAC TTAATAGCTG CAATGCTTGA TATAGAGGTT GCATCAGCAA ATGACCAAAC ATTCTCACAC TCAGACATAA GAAGAACAGC AAGAATGTTA ATGCAAATGC TTCCAGGAAC AGACTTCATA TTCTCAGGAT ATAGTGCAGT TCCAAACTAC GATAACATGT TTGCTGGATC AAACTTTGAT GCAGAAGACT TTGATGACTA CAACATACTT CAAAGAGACT TAAAAGTTGA CGGTGGATTA AGACCAGTTA CAGAAGAAGA AACTATAAAG GTTAGAAATA AAGCTGCCAA ATGCATACAA ATAATCTTTA GAGAATTAGG ATTCCCAGAA GTTACTGATG AAGAAGTAGA AGCTGCAACT TACTGTCACG GAAGTAAGGA AATGCCAAAC AGAAATGTAG TTGAAGATTT AAAGGCTGCA GAAGAAATGT TAGAAAGAAG AATAACAGGA TTAGATATAA TAAAAGCTTT AAGCAAAAAT GGTATGGAAG ATATAGCAAA CAATTTATTA AACATGCTTA AGCAAAGAGT TACTGGAGAT TATCTTCAAA CTTCAGCAAT CTTAGATAAA GATTTCAATG TTATAAGTGC TGTTAATGAT GTAAATGACT ATATGGGACC TGGAACAGGA TATAGACTAG ATGGTCAAAG ATGGGAAGAA ATCAAAAAAG TTCCTACAGT AATGAGACCA GAGGATATAG AGTAG
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Protein sequence | MKSKRFQVLS ERPVNQDGLI GEWADEGLIA LDSPNDPKSS IKIENGIITE LDGRSRDEFD MIDKFIAEYA INIEDAEASM KLSSKEIARR LVDINVSRDE IVKITTSITP MKAVEVIQEM NVVEMMMALQ KMRARRTPAN QCHVTNVKDN PVQIAADAAE AALRGFAEQE TTVGIVRYAP FNALAILVGS QVGRGGVLTQ CAVEEATELD LGMRGLTSYA ETVSVYGTES VFTDGDDTPW SKAFLASAYA SRGLKMRFTS GSGSEALMGY SEGRSMLYLE SRCIYITKGA GVQGLQNGAV SCIGMTGAVP SGIRAVLGEN LIAAMLDIEV ASANDQTFSH SDIRRTARML MQMLPGTDFI FSGYSAVPNY DNMFAGSNFD AEDFDDYNIL QRDLKVDGGL RPVTEEETIK VRNKAAKCIQ IIFRELGFPE VTDEEVEAAT YCHGSKEMPN RNVVEDLKAA EEMLERRITG LDIIKALSKN GMEDIANNLL NMLKQRVTGD YLQTSAILDK DFNVISAVND VNDYMGPGTG YRLDGQRWEE IKKVPTVMRP EDIE
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