| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0985 |
|---|
| Symbol | |
|---|
| ID | 4203996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1123350 |
|---|
| End bp | 1124597 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565542 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698308 |
|---|
| Protein GI | 110801724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.257353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAT TTTTAGAAAA AAGCTCAAAA ATACAAGATT ATTTTACAGA CTGGAGAAAT
ATTTACGCAA AACCTTATAA TAAAAACGAA GTTGATCCTT ATACAAAAAC TAGAATAATT
TTAATGAATG GAGCTGAATT TGAAGCAAAC TGGTTTTCTC ATCAATTCTC TAGAAATTGT
AATAACAATG AACTTAGAAG AGAAATTGCC CTTGCTAGAA GATTAGATAA ACAACAACAA
ATGCTAATTA GTTCACTAAG ACCTGCTAAT GAAAGTATTT TAGAAACTAC TATAAGTTAT
GAACAACTAG CTGTAGATTT AACTGCTAGA CTTGCAAAGC GTGAACCTAA TGAACATGTT
AAAAAAGCTT TAGATTTTGC ATTACTTGAG GATTTTGACC ATTTATATAG ATATTCAGAT
TTATTATTTA TGGAAGAAGG AACAAAAGCA GAAAATCTAG TTGGACATTA TACAGAAATT
ATGCCAGGTA GACCAACTAT TGCTCATCAT AGATGCCCTA ATGATAACAT AAGAAACTTT
GTTGACTTTA AAACAGCAGA CCTTATTACT AAACTAGATA TATCAATAAT TACTGCGGCA
GAACAACAAA CTATGAATTA TTACATGAAT ATAGCAGGTT TCTATACTAG TGATATTGGA
AGAAATCTTT ATCAAGAAAT AGGATTAATA GAAGAACAAC ACGTTTCTCA CTATGGAAGT
CTTTTAGATC CTAACTGTAC ATGGCTTGAA AATCTACTTA TGCATAAATA CACTGAAGCA
TATTTGTATT ATTCTTGTTA TAATTCTGAA GTTGATCCAT ATATTAAAGG ACTATGGGAA
CAATGCTTCG TTCAGGAAGT TACTCAATTA CATAAAGCTT GTGATCTTCT TAAAAAATAT
GAAAATAAAG AATGGCAAGA AGTTATTCCA AATGGTGAAT TCCCAGAACT TCTAACACTT
GGAGAAAATA TATCTTATGT TAGAGATATA TTAGATAATA CTGTTAATAA TACAACTATA
AAAGATGATT ACGTTGATGT AAGTAAATTA GGTCCTGATT CATCATTCCA TGAATTCCAA
AATAAAGTTA ATAAAAATGT TGAAGATGTT CCAAGTCATA AGGTCATAGT TGATTTTATT
TCAAAAAATA ATGAAGATTA TAGATTTGAA ACAAAAGAAA ATCCAATTCT TGCTTTAAGA
GATAGAAAAT CTGATAATAC TTCTATTGGA AGAACATCTT TAAGTTAG
|
|---|
| Protein sequence | MNPFLEKSSK IQDYFTDWRN IYAKPYNKNE VDPYTKTRII LMNGAEFEAN WFSHQFSRNC
NNNELRREIA LARRLDKQQQ MLISSLRPAN ESILETTISY EQLAVDLTAR LAKREPNEHV
KKALDFALLE DFDHLYRYSD LLFMEEGTKA ENLVGHYTEI MPGRPTIAHH RCPNDNIRNF
VDFKTADLIT KLDISIITAA EQQTMNYYMN IAGFYTSDIG RNLYQEIGLI EEQHVSHYGS
LLDPNCTWLE NLLMHKYTEA YLYYSCYNSE VDPYIKGLWE QCFVQEVTQL HKACDLLKKY
ENKEWQEVIP NGEFPELLTL GENISYVRDI LDNTVNNTTI KDDYVDVSKL GPDSSFHEFQ
NKVNKNVEDV PSHKVIVDFI SKNNEDYRFE TKENPILALR DRKSDNTSIG RTSLS
|
|---|
| |