| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0968 |
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| Symbol | prtP |
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| ID | 4204193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1099161 |
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| End bp | 1103873 |
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| Gene Length | 4713 bp |
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| Protein Length | 1570 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565525 |
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| Product | cell wall-associated serine proteinase, lactocepin precursor |
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| Protein accession | YP_698291 |
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| Protein GI | 110802449 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAC AGAAAAAACA GATGAAGAGG TTTTTATCCT CAACGCTCAA TGGTTTGGTG
GTATTGGCTC TTATAATGCC TAGTAGTGTA GGAACTAATG TAATGGCAGA GGAAATTCAA
AATGGGACAA GCCATACAGT AAGAAATTTA GAGAATATTG CTAGGGATGA ACTTTATTTT
AAGTATCAAA ATCCAAATGA AGTAGTAAGA GTTATAGTTG AACTTGAAAA GCCAGCAGCT
ATAGAGGAAG CTAAGGCTGA AGGTGAGAAA AAACCATCTG AAGCAAAAAT TCAAGAAGTA
AAAGAAGAAC AAAAAGATGC TAAGGATGAA GCAGAAGAAA TTACAGGAGA AAAGATAAAT
AAAAGCTTTG GAACCTTAAT AAATGGATTC AGTATCGATA CAAAAGTAAA AGATATAGAG
GAATTAAAGA AAATCGATGG TGTAAAAAGC GTAAAAGTTG TAAAGACTTA TTATCCAGCT
ATGAATTCTG CTAAAGATTT AACACAGGCA GTAGAAACTT GGAAAGAGTT AGGCTTAAAA
GGTGAAGGAA TGGTTGTTTC TATTATAGAT TCAGGAATAG ATCCAAATCA TAAAGATATG
AAAATAACAG ATTCATCAAA AGCTAAGCTT AAAAAAGAAA ATTTAAAAGA TGGACCAGGA
AAATATTTTA CAGAAAAAAT TCCATATGGA TATAATTTTG CTGATGAAAA TGAAAATATT
ATAGATACAC ATCCAAAAGT AGATATGCAT GGAATGCATG TAGCAGGAAT AGTTGCTGCC
AATGGAAGTG ATGAAGAGCT TGCTAAAAAT GAGGCAATAA AAGGAGTAGC ACCAGAAGCA
CAATTACTAG CTATGAAAGT TTTTTCAAAT AATCCTAATA GACAAGGGGC AGCTGAGGAT
GATATAGTAG CTGCCATTGA AGAGTCTGTT AATCAAGGAG CAGACATAAT AAATATGAGT
TTAGGATCTT CTGCTGGATT CCAAAAAGAA GATGATCCAG AACAAATAGC CGTTAAAAAG
GCTGTGGATG CTGGGGTAGT CGTTGTTGTG GCTGCTGGAA ATTCACAATA TTCAACGGCT
CCATACAAGG TTCCGGATAT AAAGGATACT GGTTTAGTAG GAGCTCCTGG AACTGCAAAG
GATGCACTTA CAGTAGCAAA CTATCATAAT AGTAAGATGC TATTACCAAC AATAAGCTTT
GAAGATAATG GTGAAGCAGT TAATATACCA TTTATGTTAT CAGGAGAAGA AAATAGTCTT
AATTTAGATA AAGACTTTGA TTTAGTAGAT TGTGGACTTG GAAAGGTACA AGATTTTAAA
GGAAAAGATT TAAAGGGAAA AGTTGCCTTA ATAAAAAGAG GGGAAATTAC TTTTATAGAT
AAAAATTTAA ATGCACAGGC AGCTGGTGCT GAAGGGATAA TAATATACAA TGGAGATGGT
GATGAGTCAT TTATAAATAT GGCAACAGAT CCAAAGGTTA AAATTCCATC AGTATTTGTT
AAAAACTCAG ATGGGGAAAA ATTTAAAAAT GCTATTAATA AGAATTTAAA GATAAAGTTT
ACAAACAATA AAATATTAGT TGCAAGTAGT GATGCTGGTG ATTTTGTTGA ATCATCATCA
TGGGGACCTA CTCCAAGCTT AGACTTTAAA CCACAAATAT CTGCACCAGG TGGAAATATA
TATTCAACTA TAAATGATAA TAAATATGGT ATTAAGACTG GTACATCAAT GGCAGCGCCA
CATGTTGCTG GAGGAGAAAC ATTAATAGTT GAAGGGCTTA AAAAGGAAAA TCCAAATCTT
AAGGGAAGAG ATTTAGTAGA ATTAGCAAAA AATACAGCAA TAAGTACTTC TAAGATAGAG
ATGGATAAAA ATAATCCTAA GATACCTTAT TCACCTAGAA GACAAGGAGC TGGTCTTATG
CAAATAGAGG AAGCTCTTAA AAATAAGGTT GTAGTATTAG ATGAAAATAA TAATTCTACT
GTGGCATTAA AGCAAATAGG AAATGAGAAA GAATTTACAT TAACATTAAA AAATTATGGA
GATAAAGAAG CTGAGTATGA TGTTGAAAAT TTAGGTGGAG TTTTAACAGA AACTAGTGAT
ACTTTAAAGA CTATGTCTCA TGATGTAAGG ATTGATGGGG CAAATCTTAA GTTTGATAAA
AATAAAGTTA TTGTTCCAGC TAAGGGTACA GAAACTTTAA AAGTGAAATT AACAATACCT
AAAGCCGTTT CAGAGGATAG ATTTGTTGAA GGATTTATTA AACTTACAGG AAAAGATGTT
CCATCATTAT CAGTTCCTTT CATAGGATAT TATGGAGACT GGGGAAAAGA TCAAATAATA
GAAGCTATGA ATTGGGATAG TAAAAATCAA AAGTTCATAG TTCCATCAGA AGTATTAACA
AATTTAAATG GAGCAATTGG GTACAAGCTA GGTTTAGGAG CAAAGGATGA AAAGGGAAAT
CTTAAAGTAG ATCCTAGTAA AATAGCAATA TCTCCAGATG GAAATGGAAA TGGTGATATC
ATAGCTCCAT ATTTATATTA TTTAAGAAAT GCTAAGGTAA CTGAATTAGA GTTATTAGAT
AAAGATAAAA AATCCTTAGG AGTTATAGGA CATGAAAATT ATATAAGAAA AGAGGAATAT
AGTGAACCAA GTGGAAGTGG AAAAGCTCCA AACTTATTTG AGAACTTAAC TTGGGATGGA
AAGTTATATA ACCAAAGTAC AGGAGAAAAG GAAGTTGTAC CAGAAGGACA ATATTATTTA
AATATAAAAT CAAAAGTTGA TTATGATAAT GCTAAATATC AAGAGGTAGT TGTTCCAGTA
CAAGTTGACC TTACTGCACC TAATATTGAA ATAACTTCAG GAGACAAAGT ATTAGGTAAT
AAGGACGATA ATGAAGTAGA TTATAAATTA GAATGGACTG CTAAGGATAA TGTTTCTATT
ATACCAGATA TAGCTACAGT ATATGTAAAT GGTAAAAGTG TAAGCGCTAA TATAAGTGAA
AATAATGGCA CTTATAGTTG TGATATAAAG TTAAAAAACA ATGCTTTAAA TGAAGTTAAG
GTAGCTATGA ATGATACAGC ACTTAATTTA GCTGAAGTAT CTAAGAATAT AAAGGTTGAA
TCTTCAGATC CATTAATAAA ATTTGAAGGT AACTTTGGAA CTGCTACTTT AAGTGTTGAT
AATTCTTTAG AATATCTAGT AAAGGGAGTA GTTTTAGGTC CAGTAAAAGA ATTTAAGTTA
AATAATGAAG ATGTTAAGGT AAATGAAGAT GGAACTTTTG TACATAAAGT TGCTTTAAAA
GAAGGAATGA ATAAAGTTAA TATTTATGCG AAAGATGAAA ATGGAAATGT GTTATATAAT
TATGCTAGTA ATATATTATG TGATACTAAA GCTCCTATAA TAAACTTATC ATCTCCAAAG
GTAGAATCAG ATGGTATAGT TATAACTAAT GAAGATAAAA TAAATATAAA AGGTACTGTT
GAGGATAACA CATGGGGATA TAAATTCTAT AAAAATGACA CTATTCAGTT AGAAGTTGAA
GAGAGAGCTA AGCCAGGAAA TGATAGTACA AGAAGAGAGT TTTCATATGA AGTTCCTGTA
AAAGATGGAG ATGTTATAGT ATTAAAGGCC GTTGATGTAT TAGGTCATGA AACTCTTAGA
AAGCTTACTG TTAAGGTTGA TAAAAATGCT CTAGAAGTGA CAATTGGAGG GGTATCAGAT
CAAGGAATAT ACAATAGTGA TGTAACTCCA AAGGTAGTTT CTAATGAAGA TGCAGAAATT
AGTTACTTAT TAAATGGAAA AGATTATGAT GGAAAAACTC CTATTTCAGA GGATGGAAAC
TATGAGTTAA TTGTAAAGTC TAAAGATAAA GCTGGAAATA AAACAGAAGT AAAAACTAAC
TTTACTATAG ATAAAACACC AGCAAATATT TCTGTTAATA ATATTGAAGA TGGAAGAGTA
TATAATGAAG AAATTATTCC TGAAATAGCT AGTAATGAAG AAGCTACTTT TAAATATACT
TTAAACGGAA AAGAATATGA TGGTAAGTCT AGTATAAAAG AAGATGGTGA CTATGTTTTA
AATATACAAG CAACAGATAA AGCTGGAAAT GTATCAAATA AAGAAGTTAA GTTTTCTATA
GATAGAACAC CTGCTAATAT ATTTGTAACT GGAGTTGAAG AGGGTAAAGT TTATAATGAA
CCTGTTACTC CAATAATTGA GATTGATGAG AAGGATGCAA CTTTAAAATA TACTTTAAAT
GGAAAAGAAT ATGACGGAAA ATCAATAATA GATGAAGATG GTAAGTATAT CTTAAAGGTT
GAAGCTTTAG ATAAAGCAGG AAATCCATCA GAAAAAGTTA TTAACTTTGC TATAGACAGA
AGTTTCTTAA AAAATTCAGA AAAGGATGAT CCAAATAATA ATAAGAAATA TAATGAACCT
ATTGATGAGG AAATAGTACA AAAGCCTGAA GCCAAAACTG ATTCAAAAGA GGAATTAAAG
GCTAATAAGC TTAAAGAAGA GAATAAAGTT AGTGAAGAAA ATAAAAGTAA TGAAGAGAAC
TCAGTTAAAG ATGAAAAACT TCTTAAGAAA GAAGGAACAT TGCCAACAAC AGGACAAGTT
CTTGGAGGAT CTATGCTATC TTTATTAGGA GCTATAATGG CTTCAGTTGG AGCTGTTTTC
TTAAAAAGAA AAAATAAAAA CAAGGAAGAA TAG
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| Protein sequence | MKEQKKQMKR FLSSTLNGLV VLALIMPSSV GTNVMAEEIQ NGTSHTVRNL ENIARDELYF
KYQNPNEVVR VIVELEKPAA IEEAKAEGEK KPSEAKIQEV KEEQKDAKDE AEEITGEKIN
KSFGTLINGF SIDTKVKDIE ELKKIDGVKS VKVVKTYYPA MNSAKDLTQA VETWKELGLK
GEGMVVSIID SGIDPNHKDM KITDSSKAKL KKENLKDGPG KYFTEKIPYG YNFADENENI
IDTHPKVDMH GMHVAGIVAA NGSDEELAKN EAIKGVAPEA QLLAMKVFSN NPNRQGAAED
DIVAAIEESV NQGADIINMS LGSSAGFQKE DDPEQIAVKK AVDAGVVVVV AAGNSQYSTA
PYKVPDIKDT GLVGAPGTAK DALTVANYHN SKMLLPTISF EDNGEAVNIP FMLSGEENSL
NLDKDFDLVD CGLGKVQDFK GKDLKGKVAL IKRGEITFID KNLNAQAAGA EGIIIYNGDG
DESFINMATD PKVKIPSVFV KNSDGEKFKN AINKNLKIKF TNNKILVASS DAGDFVESSS
WGPTPSLDFK PQISAPGGNI YSTINDNKYG IKTGTSMAAP HVAGGETLIV EGLKKENPNL
KGRDLVELAK NTAISTSKIE MDKNNPKIPY SPRRQGAGLM QIEEALKNKV VVLDENNNST
VALKQIGNEK EFTLTLKNYG DKEAEYDVEN LGGVLTETSD TLKTMSHDVR IDGANLKFDK
NKVIVPAKGT ETLKVKLTIP KAVSEDRFVE GFIKLTGKDV PSLSVPFIGY YGDWGKDQII
EAMNWDSKNQ KFIVPSEVLT NLNGAIGYKL GLGAKDEKGN LKVDPSKIAI SPDGNGNGDI
IAPYLYYLRN AKVTELELLD KDKKSLGVIG HENYIRKEEY SEPSGSGKAP NLFENLTWDG
KLYNQSTGEK EVVPEGQYYL NIKSKVDYDN AKYQEVVVPV QVDLTAPNIE ITSGDKVLGN
KDDNEVDYKL EWTAKDNVSI IPDIATVYVN GKSVSANISE NNGTYSCDIK LKNNALNEVK
VAMNDTALNL AEVSKNIKVE SSDPLIKFEG NFGTATLSVD NSLEYLVKGV VLGPVKEFKL
NNEDVKVNED GTFVHKVALK EGMNKVNIYA KDENGNVLYN YASNILCDTK APIINLSSPK
VESDGIVITN EDKINIKGTV EDNTWGYKFY KNDTIQLEVE ERAKPGNDST RREFSYEVPV
KDGDVIVLKA VDVLGHETLR KLTVKVDKNA LEVTIGGVSD QGIYNSDVTP KVVSNEDAEI
SYLLNGKDYD GKTPISEDGN YELIVKSKDK AGNKTEVKTN FTIDKTPANI SVNNIEDGRV
YNEEIIPEIA SNEEATFKYT LNGKEYDGKS SIKEDGDYVL NIQATDKAGN VSNKEVKFSI
DRTPANIFVT GVEEGKVYNE PVTPIIEIDE KDATLKYTLN GKEYDGKSII DEDGKYILKV
EALDKAGNPS EKVINFAIDR SFLKNSEKDD PNNNKKYNEP IDEEIVQKPE AKTDSKEELK
ANKLKEENKV SEENKSNEEN SVKDEKLLKK EGTLPTTGQV LGGSMLSLLG AIMASVGAVF
LKRKNKNKEE
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