Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0963 |
Symbol | |
ID | 4206511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1094586 |
End bp | 1095263 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565520 |
Product | hypothetical protein |
Protein accession | YP_698286 |
Protein GI | 110803447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000205634 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATG AATTTGATAT TGAATTTAAA AACTATTTGT ATCAGGTTTT AGGAAAGGAC AACCTTCAGG AACTAGAATC TAATGATGAA GATGGAGAGT GTTATTTAGA GATTGGCAGC AAGCTTTCTA TAGATCTTTC AGAAGGCATG GTTAGCCTTT TGACGGATAA GGATAGTCTC CTAGTTATTT TAAGGTTTCC AAGTGAAGCT AAGAAGAGTT TTAGAGGAGT AAGTAAAGGA AAGGTTGATT TTGGATTTCA ACTTTTTAAG AGAGAAGACT TTGATATTAA TTATGATTTT GTTGGATTTA CTTTATCAAT AAAGGATGCT GTTGATTATA GTGATATGAG GCTAGACTTT AATTTTACTC CTGAAGGTTT TGAATTTTCT GAGAAAATGA ATTACGCTTT AAATATAATT GCTATAGATG AAAAGTATAT AGTAAGAGCT ATGAGACGTA TTAGATTCCC AAGGGAGCTT TGTAAGATTA TTAGGGAGTA TTATTTAAAA ATTACAAGGG AAGATTATAA TAGAGAAGTT GCTCTAGAAG ACTTAGAAAA CCTTGATGCG ATACTTTTTG ATGGAATAAC ATCAAAGCAG GTAGAAGAAA GTTTTAGCCT ATATAAGTTT ACAGATAAAC CAGAAGAATC TAATTTAGAT AAATACATTA AAGATTAA
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Protein sequence | MENEFDIEFK NYLYQVLGKD NLQELESNDE DGECYLEIGS KLSIDLSEGM VSLLTDKDSL LVILRFPSEA KKSFRGVSKG KVDFGFQLFK REDFDINYDF VGFTLSIKDA VDYSDMRLDF NFTPEGFEFS EKMNYALNII AIDEKYIVRA MRRIRFPREL CKIIREYYLK ITREDYNREV ALEDLENLDA ILFDGITSKQ VEESFSLYKF TDKPEESNLD KYIKD
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