Gene CPR_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0952 
Symbol 
ID4204542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1082741 
End bp1083340 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content28% 
IMG OID642565510 
Producthypothetical protein 
Protein accessionYP_698276 
Protein GI110802720 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0206967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAC TAGATGATAT AACTAAATTT ATTTTTGTTT GTGATGAACC AAAGCCTTGT 
GACTTAATCT TTATACCATG CTCATCCAAA TACGAGGTAA GCGAAAAGGC TAGTTTATTA 
TATAAACAAA GATTAGCAAA ATATGTACTT CCTTCAGGCA AGTTTTCTTG TAAACTAGAA 
AAATTTCCAA ATGAAAAAAT AATAAATAAA AAGTATGCTG GTAAATATGA ATCTGATTGG 
GAATTCTGTA AGGAAGTTTT ATTTAGAAAT GATGTTCCAT TAGAATCCAT TTTAGTTGAA 
AATAAATCAA CTAATACCTC TGAAAACGCC TTTTTCTCAA GGAAAGTTAC AGATGATTTA 
AATATAGAAG TTAAAAGTGC TATATTATGT TGCCAAGCCT TTCATGCCAG AAGAGCTTTA 
ATTACTTACT CTTTAGCATA TCCTAATACA CAATTTTATG TTGTTCCAGT AGAAACTCAA 
GGAATTTCTA AGGATAACTG GTATAAATCT GATTACGGCA TAAATAGAGT TCTTGGTGAG 
CTAAGAAAAT GTGGCTCTTA TTTTGAAGAA TATATAAAAG ATTTAAATAA AATTATATAA
 
Protein sequence
MRILDDITKF IFVCDEPKPC DLIFIPCSSK YEVSEKASLL YKQRLAKYVL PSGKFSCKLE 
KFPNEKIINK KYAGKYESDW EFCKEVLFRN DVPLESILVE NKSTNTSENA FFSRKVTDDL 
NIEVKSAILC CQAFHARRAL ITYSLAYPNT QFYVVPVETQ GISKDNWYKS DYGINRVLGE 
LRKCGSYFEE YIKDLNKII