| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0948 |
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| Symbol | |
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| ID | 4204616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1079394 |
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| End bp | 1081652 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565506 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_698272 |
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| Protein GI | 110802366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.216997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGTTT TATTAACATT CTTGTTTAGC TTTTTACCTT ATATGCCAGT AATGGCTGAA
GTAGAAAATA ATAATACTAA AGTAAATGAA AAGACTTTAG TTAAGAATGA GAGTGAAGCT
TTTGCTGTAG TTGTAGGAGA TTTTTTACAA GTTAATTATA ACGGTTCTGA TTGGGATCCA
AAAAATATGA ATGGAGTGCT GAAAAAGTAT AAAAATGGTT TATATGAAGG CACTTTAAAG
TTAAAGGCAG GAAATTATAA TTATAAAATT GCCATGAATG GAACTTGGGA TGAGAGCTAT
GGTAATAATG GTCAAAACAT AGCTTTGAAT TTATCAAAAG ATTCAGAGGT AATATTTAGG
TTTGATTATA AAAATAAAAA GGTATATGAT TCAATAAATA ATCCTGATCA ATTAAAAATA
AATGGAGAGG TTACTTTCAA AAATAATCAG GTTAACTATG ATGAAAATGC CATTACAAAT
CTTAAATTAA GTGGAAGTGA TGCTAAAAAA GAAAATATAA AAGAAGTTTA TATGGACCTT
ACAAATGTAG GTGGCCCTAA TAAGGTGTTA ATGGATTTAA ATTTATTAAA GGATAATTCA
TTAAGCCAAA GCATTGGAAT AAATGATAAT GTAGTAGCTG GAGAAAAAGA AATACCAGTT
ACAATAGTTG ATAAAAATGG TGAAAATCAT AAAGCAAAAG GAATTTTAAC TGTTAAATCA
AAGGTTGGAG TTGGACCTTT AGATTTTGGC TTTGATGAGT CTAGAATTTA CTTTACAGTG
ACAGATAGAT TCTTTAATGG AGATAAGAAT AATGATGATC CTCATGGAAA CAACTATGAT
AAGAAGAATC CATATACTTA TCATGGAGGA GATTTAAAAG GATTAACAGA TAAGATTTCA
TATTTAAAAG AACTTGGAAT AAACACAATT TGGATAACTC CTATTGTTGA GAATACTGAT
TTTAATCAAA TGTTCTCTCA AGGAAAAACT CAATACTCAT GTCATGGTTA CTGGGCTAAG
GATTTTGAAA AATTAGATCC ACATTTAGGA ACTATGGATG ACTTAAAAAC ATTAATAGAT
ACAGCACATG ATAGTGGAAT AAAAATAATG GTTGATGTTG TTTTAAATCA TGCTGGCTAT
GGAATGAAAA ATAAGGATAA TAGTGGAGCT AATAACTCTC CAACAGAGGA AGATATAGCT
AAGTTCAAAG GAATGTTTAG AGAAAATCCA GGAAATGATT TTATAACTCA AGAGTCAGCA
GGACTTCCAG ATTTTAAAAC AGAGGATCCA GAAGTAAGAG AAAAATTAAT AGAGTGGCAA
ACAGGATGGA TTGAAAGATC AAAGACTGAA AAAGGAAATA CTATTGATTA TTTTAGAGTT
GATACAGTTA AGCATGTTGA TAATACAACT TGGAAGGCAT TTAAAAATAA ATTAACAGAA
ATAAACCCAA GCTTTAAAAC TATTGGTGAA TATTTTGGAG CTGATATAAA TAACGATGGA
GGACAACTTC AAAATGGTCA AATGGATGCT TTATTAGACT TTGGTTATAA AGGAAAAGCA
AGAGATTTTG TAAATGGAAA TATTGAGGGA ACTTCAGCTT ATTTAGATGA TAGAGCAAGT
AAAATAAGCA ATACCAATTT AATGGGACAA TTCTTAAGTA GTCATGATGA AGATGGATTC
CTAAAGACTG TGGGAGATGA CTTAGGCAAA CAAATGCTTG CTGCTTCTCT TCAAATAACA
GATAAGGGTA TCCCTGTTAT ATACTATGGA GAAGAACTTG GAATGTCAGG ATGGAATGGC
TTTGAACAAG GAGATCAAAA TAGATATGAT ATGGATTTTG AAAGATTAAA TGATCCTAAG
TATAAAAAGG TTCATGATCA TTATGAAAAA CTTCTTAATA TAAGAAAAGA ATACTCTAAG
ATATTTTCAA AGGGAAATAG AAAAACTATT GCAGGAAACA ATGAAGAAGG ATATTCAGTA
GTATTAAGAA GCTATAATGG AAAAGAAATT ACTCCTATGA ATTTAAGTGA AAATAATGAA
GAGAAAAATA TTACAAATGG ACAAAATCTA TTTGTTGTAT TAAACACTAA AAATGAAGAT
AAAGATATAA GTTTTAAAAC AAATTTCAAA GAAGGAGAGA AGGTTAAAGA CTTATATAGT
GGAAATGAAT ATTCAATAGG CAAAGATGGA AAGGTAACTG TAAAAGTTCC TTCAAAAGAA
GAAGGAGGAA CTGCTATCTT AGCTCTTAAA AATCGATAG
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| Protein sequence | MLVLLTFLFS FLPYMPVMAE VENNNTKVNE KTLVKNESEA FAVVVGDFLQ VNYNGSDWDP
KNMNGVLKKY KNGLYEGTLK LKAGNYNYKI AMNGTWDESY GNNGQNIALN LSKDSEVIFR
FDYKNKKVYD SINNPDQLKI NGEVTFKNNQ VNYDENAITN LKLSGSDAKK ENIKEVYMDL
TNVGGPNKVL MDLNLLKDNS LSQSIGINDN VVAGEKEIPV TIVDKNGENH KAKGILTVKS
KVGVGPLDFG FDESRIYFTV TDRFFNGDKN NDDPHGNNYD KKNPYTYHGG DLKGLTDKIS
YLKELGINTI WITPIVENTD FNQMFSQGKT QYSCHGYWAK DFEKLDPHLG TMDDLKTLID
TAHDSGIKIM VDVVLNHAGY GMKNKDNSGA NNSPTEEDIA KFKGMFRENP GNDFITQESA
GLPDFKTEDP EVREKLIEWQ TGWIERSKTE KGNTIDYFRV DTVKHVDNTT WKAFKNKLTE
INPSFKTIGE YFGADINNDG GQLQNGQMDA LLDFGYKGKA RDFVNGNIEG TSAYLDDRAS
KISNTNLMGQ FLSSHDEDGF LKTVGDDLGK QMLAASLQIT DKGIPVIYYG EELGMSGWNG
FEQGDQNRYD MDFERLNDPK YKKVHDHYEK LLNIRKEYSK IFSKGNRKTI AGNNEEGYSV
VLRSYNGKEI TPMNLSENNE EKNITNGQNL FVVLNTKNED KDISFKTNFK EGEKVKDLYS
GNEYSIGKDG KVTVKVPSKE EGGTAILALK NR
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