| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0922 |
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| Symbol | cas3 |
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| ID | 4205732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1052341 |
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| End bp | 1054551 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642565480 |
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| Product | CRISPR-associated helicase Cas3 domain-containing protein |
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| Protein accession | YP_698246 |
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| Protein GI | 110802774 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.013511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA GTAAGTTTAC TGCAAAATTA TATAAAATTA TTAAAGAAGA TAAAATTATT
AAAGAAAATA AAACTGTTAG AGAGCACACA AATGATTTAT TAAATAACTT AGAATTTTTA
AATGATTTAG GATATATAAA TAAAGAATCT ATATATAATT TAACTAAAAT TGCATGTGAA
TATCATGATT ATGGAAAGGT TAATAGGGAG TTCCAAAATA GAATAAAAAA TGAAACAAAA
TTTAATGAGA AAAAAGAGAT AGCACACAAT GTGCTTTCTC TTTACTTTAT AAACCCAGAT
GACTTTGAAG AGGAAAAAGA TTACTATAGA GTATGTTTTG CTGTATTATA TCATCATTAT
TATTGTGATG GACTTAAAGT TTTAAGTGAA AAAACTGATT TGATAGAAAA TTTATTAAGT
GAATTTGAAA CTTATGAACT TGATGAGTTT ACTCCTATGG AAATAGGTGA TATAAAGAGT
GATGATGAAG CTATTTTAAT AAAAGGCTTC TTAAATAAAT GTGATTTTAG TGCAAGTGGA
AATACTGAAA TAGAGTATAA AAATAATTTC TTAGAAGAAA GTTTAGAGAG ACTATTAAAT
TCTTGGAAGA TAGATAATAA AGAGGCTAAA TGGAATGAAC TTCAACAGTT TGCTAAGAAT
AATAGAGATA ATAATATAAT GGTTGTTGCC CAAACTGGAA TGGGTAAAAC TGAAGCAGGT
TTGCATTGGA TTGGAAATAA TAAAGGTTTT TTTATTCTTC CATTAAAGAC AGCCATAAAT
GCTATATATG ATAGAGTATC TAATGGTATA GTAAAAGAAA ATAACAATGA AGAAAAGCAT
AAAGTTGCAT TAATTCATTC AGATTCTTTA TCATATTACA TTTCTCAAAA TGAAGATACA
AACATAGTAT TAGATCATCA TAGAGAAGGA AAACAACTAT CTATTCCTAT TAGCATAGCA
ACCTTAGATC AAATATTTGA TTTTGTATTT AAGTACAAGG GCTATGAAGT GAAATTAGCT
ACTTTATCAT ATTCAAAAGT GGTAATAGAT GAAATACAGA TGTATAGCGC TGATTTATTA
GCCTACTTAA TATTAGGAAT AAAAACCATA ATAAGGCTAG GAGGAAAAGT TGCAATTTTA
ACAGCTACCT TAGCTCCCTT TGTTAAAGAT TTATTATTAG AAGATAATAA TAAATTAGGC
TTTGTAGAAG GTACATTTGT AAATGAATTA AAAAGGCATA ATTTAAAAAT ATATGATGAC
AAGATAAATG CAGATGTAAT TTATAATAAG TATATTGATA ATAAAGAGAA GAAAATAAGC
AATAAAATAT TAGTTGTATG CAATACGATA AAAAAGGCTC AAGAAATTTA CAATGAACTA
AAAGATAAAA ATATAGATAA TTTAAATATT TTACATAGTA AATTTATAAA AAGAGACAGA
GCTTATAAAG AAGAGCAAAT ATTAGAGTTT GGGAAAACTA ATAATATTGG AGATGGCATA
TGGATATCAA CTCAGATTGT AGAAGCTAGT TTAGATATTG ATTTTGACTA TTTATTTACA
GAACTATCAG ATATAAATGC TTTATTCCAA AGACTTGGTA GATGTAATAG AAAAGGGGTT
AAGCCTGCTT ATGACTATAA CTGTTATGTT TTCTTACAAA TAGAGAGAAA TTTATTAACT
AATGGAGATA AGGGGTTTAT AGATAAAAAA ATATATGAAT TATCAAAAGA AGCATTAAGA
AACGTAGATG GTCTTTTATC AGAAGAGGAA AAAGTAAATA TTATAAATAG AACATTAACC
ACTGAGAATA TAAAGGGAAG TGATTATTGG TCAAAATACA CAGAATTTTT TGATTATGTT
AGTGGACTTA ATCCATATGA AGTAGACAAG AAAGATGTTA AACTTAGAAA TATAATATCT
TTTGATATAA TACCTCAATG TATTTATGAG AAAAATGAAT CAGAAATTGA AAGCTTACTT
GAAATTATAA ATGATGAAAA AACAGATAAA ATAAATAGAA TAAAATCCAT AGATAAAATA
AAAAGTTTTA CAGTATCAGT TGGGCAATAT GATATTGAAC TTTTAAAAAA TAAACTTATT
ATGGAGTTAG AAGTAGGAAA GTATGAAAGA ATTCCAGTAT ATAAATGCAA TTATTCAGAG
TTAGGATTTA CTAGAAACAC TAAAGAAGAT GTATATGATA ATTTCATATA A
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| Protein sequence | MDLSKFTAKL YKIIKEDKII KENKTVREHT NDLLNNLEFL NDLGYINKES IYNLTKIACE
YHDYGKVNRE FQNRIKNETK FNEKKEIAHN VLSLYFINPD DFEEEKDYYR VCFAVLYHHY
YCDGLKVLSE KTDLIENLLS EFETYELDEF TPMEIGDIKS DDEAILIKGF LNKCDFSASG
NTEIEYKNNF LEESLERLLN SWKIDNKEAK WNELQQFAKN NRDNNIMVVA QTGMGKTEAG
LHWIGNNKGF FILPLKTAIN AIYDRVSNGI VKENNNEEKH KVALIHSDSL SYYISQNEDT
NIVLDHHREG KQLSIPISIA TLDQIFDFVF KYKGYEVKLA TLSYSKVVID EIQMYSADLL
AYLILGIKTI IRLGGKVAIL TATLAPFVKD LLLEDNNKLG FVEGTFVNEL KRHNLKIYDD
KINADVIYNK YIDNKEKKIS NKILVVCNTI KKAQEIYNEL KDKNIDNLNI LHSKFIKRDR
AYKEEQILEF GKTNNIGDGI WISTQIVEAS LDIDFDYLFT ELSDINALFQ RLGRCNRKGV
KPAYDYNCYV FLQIERNLLT NGDKGFIDKK IYELSKEALR NVDGLLSEEE KVNIINRTLT
TENIKGSDYW SKYTEFFDYV SGLNPYEVDK KDVKLRNIIS FDIIPQCIYE KNESEIESLL
EIINDEKTDK INRIKSIDKI KSFTVSVGQY DIELLKNKLI MELEVGKYER IPVYKCNYSE
LGFTRNTKED VYDNFI
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