| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0918 |
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| Symbol | cas6 |
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| ID | 4204182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1048254 |
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| End bp | 1048976 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642565476 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_698242 |
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| Protein GI | 110802438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00903445 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT TAGTTGCTGG GAAAATGAAA AATAAAAAAA TCTCTTTATC ATATAGAATG
TTTATTTTAA GTATGATAAA AAAGATAATT TCTGATTTTG ATGAAATTTA TTTTGAAGAG
ATGTTTTTTT ATGAGGGTAA GAAAACTAAG AAAACCAAGC CATTTACTTT TAGTGTGTTT
TTTAAAGACT ATAAAATTAA TAGGGATTTT GTAGATGTTG AAGGAGAAGT TAAAATAGTA
ATTTCTACTC CAGATATTAA ACTAAACATG GTTCTTTTTA ATGGTTTTAT GAAAATGAAG
GAATATGGTG ACTTTGAAAA AACATCTGTA AGAATAGAAA AAGAAAGAAA AGTAGAAGAA
AATGAAGCTA TATTTAAAAC TTTATCACCA ATATTTATAA AAGATACTAA TAATAAAGCT
CTTGAAATTG AAGATGAAAA TTATAATAAA GAGCTTAATT ACTTTGCAAA CCTATCTCTT
AAATCTTTTA GAGGATATGG GTTAAAAGAG GAACTTGTAT TTACTCCTTT AAAGATGAAA
AAGGTAGTGG TAAAGGAAGA AATAAGTGGC TTTAAAGAAA AGACTAATAA GAAATATATA
TACTTTAATT CTTACTCTGG AGTATTTCAC TTAAGAGGAG ATAAAGATGA TTTAAACTTA
CTAAAAGAAT TAGGATTAGG GTGTAGAAGA AATTCTGGTT TGGGAAGCAT TGATTTAATT
TAA
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| Protein sequence | MKILVAGKMK NKKISLSYRM FILSMIKKII SDFDEIYFEE MFFYEGKKTK KTKPFTFSVF
FKDYKINRDF VDVEGEVKIV ISTPDIKLNM VLFNGFMKMK EYGDFEKTSV RIEKERKVEE
NEAIFKTLSP IFIKDTNNKA LEIEDENYNK ELNYFANLSL KSFRGYGLKE ELVFTPLKMK
KVVVKEEISG FKEKTNKKYI YFNSYSGVFH LRGDKDDLNL LKELGLGCRR NSGLGSIDLI
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