Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0914 |
Symbol | |
ID | 4205403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1046047 |
End bp | 1046568 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565472 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_698238 |
Protein GI | 110802138 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0131013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTG ATTTTGAGAA TTTAAAAGTA CAAGGAATAA AGTTTAATTA TTATTTTGTC TGTAAAAGAA AATTATGGCT CTTTGATAAG GGGATTTCAA TGGAAGATAA TAGCGATAGG GTTTTACATG GAAAAGTAGT ACATGAAAAT TCTTATATAA GGTCAAATAG TCACAAAGAA AAGCTTGTAG ATGACATTAT AAAATTAGAT ATTATGGAAA ATGAAACTGT AAAAGAAGTA AAGTTATCAA GCAAAATGAA AATTTCAGAT AGAATGCAGA TTTTATATTA TCTTTTTTAC TTAAAGCAAA TAGGAATAAA TAAAAAAGGA GCCATACATT ATGTTAAGGA AAAAAGAATT GAAGAAGTTG AATTGACTGA AGATGATGAA AATAGGATAA GAGAAACTTT ACTTAAAATA AATGAAATTA TAAGGGGAAA AAAGCCTCCA AAGATTGAGA AATTACCTTA TTGCAAAAAA TGTGCATATT ATGAGTTTTG TTATGCAGGG GAGAGGGATT AA
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Protein sequence | MEFDFENLKV QGIKFNYYFV CKRKLWLFDK GISMEDNSDR VLHGKVVHEN SYIRSNSHKE KLVDDIIKLD IMENETVKEV KLSSKMKISD RMQILYYLFY LKQIGINKKG AIHYVKEKRI EEVELTEDDE NRIRETLLKI NEIIRGKKPP KIEKLPYCKK CAYYEFCYAG ERD
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