Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0913 |
Symbol | |
ID | 4204036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1044987 |
End bp | 1045940 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642565471 |
Product | hypothetical protein |
Protein accession | YP_698237 |
Protein GI | 110801443 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0351983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTT TAGGGAATAC TTTAAGAATG CTTATGATGT TAAGGAGTGG CAGAAAATTA AAGGTTAAAG AGATTGCAGA AGAATTAGAA GTAAGTGAAA AACAAGTTAA GAGATATAAA GAAGCATTAT CAGAATTTTT TTATATAGAG TCAAAATCAG GAATTGATGG AGGATATATA TTGAGAGATA AATATATCCC CATAAAAGAA TTACTTGATG AGCATGAAAT AAATTTACTA AAGTATTCTA TAGATGCTTT AGAGGATTTC TCTTTAGAAA GCAATAAAGA TCTAAAGAGA GCAATAGATA AAATAAATTA TTCCATTGAA AAAGGACATA ATTCCAATAA TGAAAAAACT AATAGCATAA TCCCTTACGG AAGAAGTTTA CCAATAAATA ATAAATTACA AGAAATGATA GATGTAATTT TTGAAGCCAT AATTTCTAAT AAAGAGGTTT TTATTGAGTA TAGTGGGAAC AATGGAGAGG TAAGCAAGAG AACTATTCAA CCTTATAAAA TATTTACCTT TAAAGGTGAG CAATATGTAA TTGCTAATTG TCTTTCAAAA AATCAAGTAA GATATTTTAA GTTAATAAGA ATAAAGGGAT ATCATATAAG CAATAAAATT TTCAAAAAAA CATTAGATGT AGATAAACTA ATAGAAAACA ATAAGAAAAA TAGCATTGGG ATATTTGGAG GTAAAAAGTA TAATTTAATT TTAGAAATAA CTCCACCTAT AGCTAATACT ATAAAAGAGA AAATTTGGGT CGATAATCAA GAAGTTATTG AATTAGAAAA TGGTAAAATA TTATTTAAGG CCACTATGGA AGGACTTCCA GAAATTATTT CGTGGATTTT AAGCATGAGA GAGTATGTAA AAATAATAGA GCCTCTTGAA ATAAAAGAAG AAGTTAGATT AAGTGTTCAA AAAATTATAA ATAATTTATA TTAA
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Protein sequence | MSTLGNTLRM LMMLRSGRKL KVKEIAEELE VSEKQVKRYK EALSEFFYIE SKSGIDGGYI LRDKYIPIKE LLDEHEINLL KYSIDALEDF SLESNKDLKR AIDKINYSIE KGHNSNNEKT NSIIPYGRSL PINNKLQEMI DVIFEAIISN KEVFIEYSGN NGEVSKRTIQ PYKIFTFKGE QYVIANCLSK NQVRYFKLIR IKGYHISNKI FKKTLDVDKL IENNKKNSIG IFGGKKYNLI LEITPPIANT IKEKIWVDNQ EVIELENGKI LFKATMEGLP EIISWILSMR EYVKIIEPLE IKEEVRLSVQ KIINNLY
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