| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0907 |
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| Symbol | msmK |
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| ID | 4205441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1039170 |
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| End bp | 1040297 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565465 |
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| Product | sugar ABC transporter, ATP-binding protein |
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| Protein accession | YP_698231 |
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| Protein GI | 110802176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0858146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTTTTA TAGAATTTAA GAATGTAGAA AAACAATATA AGAATGCAAC AAAGAAGTCA
GTTACTGATT TTAATTTATC CATAGATGAA AAAGAATTTA TAGTATTTGT AGGACCATCA
GGATGTGGTA AATCAACAAC TTTAAGAATG CTTGCAGGTT TTGAAGAAAT AACTGGAGGA
ACTATTTCAA TAGATGGAAA TATAGTCAAT AATACGCCGC CAAGAGAACG TGGAATATCT
ATGGTGTTCC AAAACTATGC ATTATATCCT CATATGACAG TAGAAGATAA TATAGCTTTT
GGATTAAAGA ATATTAAAAC TCCAAAAGAT GAAATAAAGA AAAAAGTAAA CTGGGCAATT
GAGATTTTGG GTTTAGAAGA ATACAGAAAG CGTAAGCCTA AGAATTTATC TGGAGGACAA
CGTCAAAGGG TTGCACTTGG AAGAGCAATA GTACGTAATC AAAAAGTATT CTTAATGGAC
GAGCCTTTAA GTAATTTAGA TGCTAAATTA CGTGTCAGTA TGCGTAATGA GATAAGTAAA
TTGCATAGAG AACTTGGAAG TACTACAATT TATGTTACCC ATGATCAGGT TGAAGCTATG
ACTATGGCAG ATAGAATTGT TGTTATGAAA GATGGAATAA TACAACAAAT AGGAACACCT
ATGGACTTAT ATGACAATCC TAGAAACAAA TTTGTTGGAA GCTTCATAGG CTCACCACAA
ATGAACTTTC TTAATGTTGA AGTTAAAGGA AATAAAGCTA TATTAGAAAA TGGAAGCAAA
ATAACGCTTC CAGAAGGAAT ATTAAAAAGA ATGAACAACA GACAAGGCAA ATTATGTATG
GGATTTAGAG CTGAAGATAT AAAGCTTGAT AATCTAAATA TTGGATTATT TGAAGACAGT
ATTATTACTT CAGCTATAGA AAATACAGAA ATCATGGGAA ATGAAAATAA CTTGTATTTT
AAAATAGGAA ACACTACAGC AGTAGCAAGA GTAGGAAAAG AAGACGTAAA GGAAATTGGA
GAGCAATTCA AATTTGTAAT CAATGTAAAT AAAGTTCATT TCTTTGACTT GGATACTGAA
GAAAATATAC TAAACTTAGG AAATACCCTA ACTTTAGATT ATAATTAA
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| Protein sequence | MGFIEFKNVE KQYKNATKKS VTDFNLSIDE KEFIVFVGPS GCGKSTTLRM LAGFEEITGG
TISIDGNIVN NTPPRERGIS MVFQNYALYP HMTVEDNIAF GLKNIKTPKD EIKKKVNWAI
EILGLEEYRK RKPKNLSGGQ RQRVALGRAI VRNQKVFLMD EPLSNLDAKL RVSMRNEISK
LHRELGSTTI YVTHDQVEAM TMADRIVVMK DGIIQQIGTP MDLYDNPRNK FVGSFIGSPQ
MNFLNVEVKG NKAILENGSK ITLPEGILKR MNNRQGKLCM GFRAEDIKLD NLNIGLFEDS
IITSAIENTE IMGNENNLYF KIGNTTAVAR VGKEDVKEIG EQFKFVINVN KVHFFDLDTE
ENILNLGNTL TLDYN
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