| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0889 |
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| Symbol | |
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| ID | 4204096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1022942 |
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| End bp | 1024096 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565448 |
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| Product | ISCpe2, transposase orfB |
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| Protein accession | YP_698214 |
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| Protein GI | 110801679 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.688854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATATCCAA CTAAGAAACA AGCCGAGCTA
ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA
ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAG
AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA
AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGA TTCTGTTGAA
AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAACAG GTGGCATACC TAAATTTAAG
TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTAG TAAAAGCTAA GGGTAATGTA
AATATTGAGA TAGTAGGTAA AAGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA
AATTCAAGAA ATGTAGATGG AAATATTAAA AGAGTTACTG TGAGCAGAAC ACAATCTGGT
AAATATTTTG CATCTATTCT TTGTGATGTA AATATTCAAG AATTACCTAA AATAGATAAA
AAAGTTGGTG TAGATGTTGG ATTAAAAACT TTTGCTGTTT GTTCTGATGG ATATGAAGAA
GCTAATCCTA AACACTTTAG AAAGGTAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA
GCACGTAAAG AATATAACTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA
CATGAAAGGA TAGCAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT
AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAC
AAACTTGCTA AAGTAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC
AAGGCTGAAT GGTATGGTAG AGAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA
CTATGTTCTG AATGTGGCTA TAAGAATATA GAAGTTAAAA ACCTAGGTTT AAGAGAATGG
GTATGTCCCG AATGTGGAAC ATACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGGAA
AAGCTGATAG CTTAA
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| Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE
NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQDSVE NLGAGYDKYY KKTGGIPKFK
SKKNEIQSYT TKLVKAKGNV NIEIVGKRIK LPKLGLVKIE NSRNVDGNIK RVTVSRTQSG
KYFASILCDV NIQELPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKVE KRLIKLQRDL
ARKEYNSKNY HKNRIMIAKL HERIANQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH
KLAKVISEAS WSEFRRMLEY KAEWYGREIV IAPPDYASSQ LCSECGYKNI EVKNLGLREW
VCPECGTYHQ RDLNASINLE KLIA
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