| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0868 |
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| Symbol | |
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| ID | 4204559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1005492 |
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| End bp | 1007129 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 642565427 |
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| Product | EAL domain-containing protein |
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| Protein accession | YP_698193 |
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| Protein GI | 110803278 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000558008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GGGTGTCTTG GGTAAGTATA GTATTTTTAA TAATTATAAT TGGTTTAGCA
ATTACAATTA AATTTGATTG TAAGAAAGTT AATTGTAACA GAAAAACAAT TAAAGTAGGA
TTTTATGAAT ATTATCCTTA TTATTATCTT AATAAAAATT CTATGCCAGA TGGCTATTAT
AATGAAATAT TAGAATTAAT ATGTAATAAG ATAAATTTAA ATTATGAGTA TGTAGATTGT
AATATAACAA ATGCTTTAGA AAAGCTTAAA TCTGGAGAAG TAGATTTAGT TTTTGGAATA
AGTAAGACCC CTGATAGAGA AAAGGATTAT GAATTTACTG ACCATTACAT AAATAATGAT
AACTTTGCCA TATATACTAA TAAAAATATA AAAAATGGTG ATTTAAAAGC TTTAAATGGA
TTAAAAATGG GGTTTTTAAA AGGAGAAGAA AATAATGAGT GGATTTTAAG GTTTTTAAAA
GATAAAGGCA TAAATGTGAA GCTTATAGAT GTATATAATT ATCCTGAAGA TGAAGAATAT
TTACATGATA ACAAAGTTGA TTTTATAATA GAAAACAAAA GAAGTAATAT AGATTATGAA
AATAAAAATA TTAAAAAAAT TTTTGAGTTT TCTTCTGGAC CAGTTTATAT AGTTAGTAGA
AAAGGAAATA AAAAATTAAT TGAAAGAATA AATTCCGCTC TTGGAGAGAT TGAAGATGAT
GAAGAGAATG ATACTAATTT ATACTTTAAT GATTTTGATG AATATTTAAA TAAATTAGAG
ATTAAAAAAT TATTTATTGG AATTTTTTTG ATTATAATAA CATTATTTAT TTATAAAAAA
AGAAAAAATA AAATATTCGC TATAAGAACT AAAAGAAAAA TTAGAAACTA TATGAAAAAT
GATAAATATA TATTATATTA TCAACCTATA GTAGATCCAA AGACAAATGG AGTAAAGGGC
TTTGAATCTC TTTTGAGATT AAATAAGAAT GGAAAAATTT TAACACCTGA TAGCTTTATA
AGGGAAATTG AAGACAATAA TATGTCTTTA GAGGTTTCTT TATGGCTTTT AAAGAAAGTT
ATTGCAGACT ACAGAATAAT CAAAGATTAT AGGATGGTCA AAGGAAGTAA TTTTTATATA
TCATTAAATG TTTCATTTAA AGAAATAGAA AATCCTAAGT TTTTAAGATC CTTAATGAAA
ATTGCAAAAG ATTATAAGAT TGATGATTGT AATATTTGTT TAGAGATAGT AGAAAAATTT
GGTATGGAGG ATATAGGAAG AATACAGAGT GCAATAAGAA TAATAAAGGA ATATGGATTT
TTAATAGCTA TAGATGATTT TGGTGTGGAG TATTCTAATT TAGATTTATT AAATAAAATT
GATTCTGATA TAGTAAAGCT AGACAAGTAC TTTGCTGATA ATTTAGATAA GTCTATTATA
AATAAAAAAA CAGTGGAATT TATATCAGAA ATATGTAATA TATCAAATAG AACCATAGTA
TTTGAAGGAG TAGAGGGAAA ATATCAGGTT AATATTATTA AGGCATTTCC ATATGAAAAA
ATATATATTC AGGGATATTT CTATTCAAAG CCAGTGGATA TTGAGACTTT AAAGGATTTT
GAAGTTAAGG ATAGTTAA
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| Protein sequence | MKKRVSWVSI VFLIIIIGLA ITIKFDCKKV NCNRKTIKVG FYEYYPYYYL NKNSMPDGYY
NEILELICNK INLNYEYVDC NITNALEKLK SGEVDLVFGI SKTPDREKDY EFTDHYINND
NFAIYTNKNI KNGDLKALNG LKMGFLKGEE NNEWILRFLK DKGINVKLID VYNYPEDEEY
LHDNKVDFII ENKRSNIDYE NKNIKKIFEF SSGPVYIVSR KGNKKLIERI NSALGEIEDD
EENDTNLYFN DFDEYLNKLE IKKLFIGIFL IIITLFIYKK RKNKIFAIRT KRKIRNYMKN
DKYILYYQPI VDPKTNGVKG FESLLRLNKN GKILTPDSFI REIEDNNMSL EVSLWLLKKV
IADYRIIKDY RMVKGSNFYI SLNVSFKEIE NPKFLRSLMK IAKDYKIDDC NICLEIVEKF
GMEDIGRIQS AIRIIKEYGF LIAIDDFGVE YSNLDLLNKI DSDIVKLDKY FADNLDKSII
NKKTVEFISE ICNISNRTIV FEGVEGKYQV NIIKAFPYEK IYIQGYFYSK PVDIETLKDF
EVKDS
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