Gene CPR_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0857 
Symbol 
ID4204643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp996592 
End bp997257 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content30% 
IMG OID642565416 
Producthypothetical protein 
Protein accessionYP_698182 
Protein GI110802334 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.109723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATCGA AAAAGAAGAT CTTGAGAAGT GTTTTATTAA TAGCACTAGG TTCAAGCATC 
TTAGCCTTTG GTAGCTATAA CTTTAACTAT CAAAATAATG TAACAGAAGG TGGAGTCTTA 
GGATTATTAC TTTTAGTAAA AAATGTTTTT GATATATCTC CATCTATAAC AAACTTAATA 
ATTGATTTTT CATTATTTGC AATAGGTTCT AAATTCTTTG GCAAAAAATT CTTAGCATGT 
TCAATATTTG CAACTTTTTG CTTCTCAGTA TCCTATAGAT TCTGGGAAAG CATAGGATTT 
TTAACACCTA ACTTTACTAA TAATATGCTA GTTGCTAGTG TTTTAGCAGG TATTGGAGTT 
GGTGTTGGTG CTGGAATAGT ATTGCGTGGT GGTGGTGCTT CTGGTGGAGA TGATGTAATA 
GCTTTATTAG GTAATAAATT TACTCCTCTT AAGGTACAAC ATGTCTACAT GTTAACAGAT 
GCCATTGTTT TATTAATGTC TTTAGTTTAT TTAGACTTTA AGCAAATATT CTTCTCAATA 
ATAGCAGTAT GTATAAGTGG TAAACTAATA AGTGTAATCT ATGAATACAA AAATGATGGT 
ATTGATACTA AGGATGAAAA TAAAGAAGCT GAAGTTTTAG AGAAAAATGG TTCTCTTACA 
GTTTAA
 
Protein sequence
MESKKKILRS VLLIALGSSI LAFGSYNFNY QNNVTEGGVL GLLLLVKNVF DISPSITNLI 
IDFSLFAIGS KFFGKKFLAC SIFATFCFSV SYRFWESIGF LTPNFTNNML VASVLAGIGV 
GVGAGIVLRG GGASGGDDVI ALLGNKFTPL KVQHVYMLTD AIVLLMSLVY LDFKQIFFSI 
IAVCISGKLI SVIYEYKNDG IDTKDENKEA EVLEKNGSLT V