| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0848 |
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| Symbol | |
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| ID | 4205391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 981305 |
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| End bp | 982681 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565407 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_698173 |
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| Protein GI | 110802126 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.720761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATAA CTAGAGACAA AAGATTTTAT AGGTTGCTTT TTAGTATTGC TTTGCCAATA
GCAGTACAAA ATTTAATAAC CTTTATGGTA AGTATGGTAG ATACTTTGAT GGTTGGAGCT
TTGGGGGAAA TTCAACTATC AGCAGTTTCT ATAGCTAATA ATTTATTTTT TGTACTTACA
ATTTTAATGT TTGGACTAGC TGGGGGATCT AATATTATGA TTTCTCAGTA TTGGGGAAAG
GGAAATGTTA AAACAATTCA TAAGATTTTG GCCATAATGT ATAGGGTATG TTTATTAATA
ACTGGTATTT TCATATTTAT AGCGTTATTT TTACCAAAAT ACTTTATGGG AATTTTCACA
ACTGATAAGG CTGTTATAGA TTTTGGAGCA AGTTATTTAA GAATTGTGTG CATAGGATAT
TTGTTCTATT CTATTACAAA CTGTACAATA ATGATGCTTC GTTCAGTAAA AACTGTTAGT
ATATCAATTA TAGTTTATAC TGCTTCTTTA GTGGTAAATT CAATATTAAA CTGGATTTTT
ATATTTGGAA ATTTAGGTGC TCCCGAACTT GGAATAAGAG GAGCTGCCAT AGCTACTATC
TGTGCTAGAA TTACTGAGTT TTCAATAGTT TTAGTGTTTA TGTTTATATA TGAAAGAAAG
ATTGGTCTTA AGATAGAACA TTTATTAAAG CTAGATAAAG AGATTTTAAA AGACTATGTT
GGATTATGTA CTCCTGTTTT ATGTAATGAA TTACTTTGGG CAATTGGAGC TTCTATGATA
TCTGTAATAG TTGGTAGAAT GGGAACAGAG GTTGTAGCTG CTAATAGTAT AAATGGAGTT
GCTCATCAAT TTGTAACAGT TTTTATATTT GGTATGTCTA ATGCAACAGC AGTAATTATA
GGAAATACCA TAGGAGAAGG TAAAAAAGAG AAAGCAAAGG AATATGCCTA TAGTATAGGG
ATTTTCAGTG TTGTCATGGG ATGTATATCA GGACTTATGA TTTTACTTAT AAAACCATTT
GTTGTTAATT TCTATAATGT ATCTTATTCA ACAAAATTAA TAGCTATGGA AATAATGACT
GTAACTTCAG GAATAATAGT ATTTCAATCT CTTGCAAGTA ATTTTATGAT GGGTGTACTT
AGAGGTGGTG GAGATGCTAA GTTTGTCTTA ATAAATGATC TTATTTTTAT GTGGCTTGTT
GCTATTCCAG GTGGATTTTT TGTAGCATTT GTTTTAGAAC TTCCAGTTGC CTTAGTATTC
TTAGTTATAA AATGTGATGA AATATTAAAA TCTCTTACCA GTGTATATAG GGTAATTAGT
GGAAAATGGG TAAATGATGT AACTAAGGAT TATGAATTTG AGGAAGTAAA GTGTTAG
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| Protein sequence | MIITRDKRFY RLLFSIALPI AVQNLITFMV SMVDTLMVGA LGEIQLSAVS IANNLFFVLT
ILMFGLAGGS NIMISQYWGK GNVKTIHKIL AIMYRVCLLI TGIFIFIALF LPKYFMGIFT
TDKAVIDFGA SYLRIVCIGY LFYSITNCTI MMLRSVKTVS ISIIVYTASL VVNSILNWIF
IFGNLGAPEL GIRGAAIATI CARITEFSIV LVFMFIYERK IGLKIEHLLK LDKEILKDYV
GLCTPVLCNE LLWAIGASMI SVIVGRMGTE VVAANSINGV AHQFVTVFIF GMSNATAVII
GNTIGEGKKE KAKEYAYSIG IFSVVMGCIS GLMILLIKPF VVNFYNVSYS TKLIAMEIMT
VTSGIIVFQS LASNFMMGVL RGGGDAKFVL INDLIFMWLV AIPGGFFVAF VLELPVALVF
LVIKCDEILK SLTSVYRVIS GKWVNDVTKD YEFEEVKC
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