| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0819 |
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| Symbol | |
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| ID | 4203999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 949924 |
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| End bp | 952011 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642565378 |
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| Product | antibiotic ABC transporter, permease protein |
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| Protein accession | YP_698144 |
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| Protein GI | 110801727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.23648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TATCACAAAT GATAGCTAAA AATAGAGTCA TTGTAATAGT ATTATCACTA
ATATTACTTA TACCTTCAAT CTTTGGTTAT TTTAAAACAA AAGTAAATTA TGATATATTA
AGTTATTTAC CAAGTGATTT AGAAACAAGA GAAGCACAAG CAATTTTAAA AGAAAAATTT
GGTTGTGGAT CCTTAGCCAT GCTTATGGTG GATAATATGG AGAATAAGGA TGTAGAAAAA
CTAAAGAAAA AAGTAGAAGG GGTAGAGGGA GTAAATGAAG TTATATGGAT AAATAATTTT
TTAGATATTT CAGTTCCTAT GGAAATTTTA CCTTCTAGCA TTAAAGATAT GATGTTTTCT
GAAAATTCAA CTCTTATGAT TGTTAAATTA AATGAAAGTG ATGCAGATAT AATTACCCAA
AATGCTATAA AAGAGATAAG AGATATAACT GGAAAGCAAG CTTTTTTAAG TGCAATAGCA
GGAGTTATAA AAGACACTAA GGACTTAGCA GATAAGGAGG CGCCAGTATA TATACTAATA
GCTGTAATTC TTTCATTGAT AATTTTGGCA TTAACTATGG AATCTTTCTT AACACCAGTA
ATATTTTTAA CAAGTATAGG AATAGCAATT GTATATAATA TGGGAACTAA TATATGGTTT
GGAGATATTT CATATATTAC AAAAGCTTTG TCAGCAGTAT TACAACTTGG TGTGACAATG
GATTATTCAA TATTTTTACT TCATAGATAT GAGGAGGAAA AATTAATTGA GAAAGATAAT
GTAAGTGCTA TGGCTATTGC CATAGAAAAA ACAATTGGCT CAATTTCAGG TAGTTCACTA
ACTACTATAG CTGGATTTTT AGCTTTATGC ATTATGCAAT TATCCTTAGG TAAAGATATT
GGCTTTGTTA TGGCTAAAGG GGTTATATTG GGGTTAATAT GTACAATTAC GGTATTACCA
GCATTTATAT TAGTATTTGA TAAATATATT AATAAGTTTA AACACAAAAC ATTATTACCT
AAGTTTGAAA AGTCATCAAA TTTTATTATA AAACATCATA AAATTATTGT TTTAATTGGA
GCTTTATTAT TAATACCTTC ATTAATTGGA TATAAAAATA CAGATGTATA TTACAACTTA
GACGATTCAC TTCCAAAAGA TTTACCATCT ATAGTGTCTA ATAATAAATT AAAAACAGAA
TACAATATGA TGTCTACAAA TATTATTCTT ATAAATGAAG ATTTACCTTC TTATAAAGTT
AATGAGATGA TTAAAGAATT AGAAGAGGTT AAGGGGGTTA CTTCTGTAAT TGGACTTGAG
AAAATAGTAG GAGAAAGGGT ACCTGAAAGT TTCATTCCAG AGGAGTTTTT AAAGAAAATT
AAAAATGGTG GATATGAAGA AATAATGCTA AACTCGGAGT ATAAAGCAGC CTCTGAAGAA
GTTACTATTC AACTTAAAGA AATTAATAAT ATTGTTAAAA AGTACGATAA AGAAGGGCTA
GTTGGTGGAG AGGCCCCATT GACTAATGAT TTAATAACTA TAGCAGATCG TGACTTTAAG
ATGGTTAGCA TTGTATCAAT AATAGCAATA TTTATAATCA TATTAATAAT ATTCAAATCA
CCAACAATAC CTGTGATTTT AGTTTTAGCT ATAGAGCTTG CAATATATAT AAATCTTGGA
ATTCCATATT ACACTAAGAC AAGTATTCCA TTTATAGCAT CCATAGTAAT TGGGACTATA
CAATTAGGTG CAACAGTTGA TTATGCAATA TTATTAACTT CAAGGTTTAA AGAGGAACTA
GCTAAGAATA AAGATAAGTA TGAAGCAATG AAAATATCAC TTCAAGGATC AACAATATCA
ATTGTAACAA GTGCTTTAAC ATTTTTTGGA TCAACAGCAG GAGTGGGAAT TATTTCTGAC
ATGGAAATGA TTAGTTCTTT ATGCACATTA ATGGCAAGAG GCGCTATAAT CAGTATGTTT
GTTATATTAT TTATACTACC AGGAATTTTG TTGATTTGTG AAAAATTAAT AGTTAAAACA
AGTAAAAACT TTGTTGAATG TGTTGAAGGA GGAAAACACA ATGAATAG
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| Protein sequence | MKKLSQMIAK NRVIVIVLSL ILLIPSIFGY FKTKVNYDIL SYLPSDLETR EAQAILKEKF
GCGSLAMLMV DNMENKDVEK LKKKVEGVEG VNEVIWINNF LDISVPMEIL PSSIKDMMFS
ENSTLMIVKL NESDADIITQ NAIKEIRDIT GKQAFLSAIA GVIKDTKDLA DKEAPVYILI
AVILSLIILA LTMESFLTPV IFLTSIGIAI VYNMGTNIWF GDISYITKAL SAVLQLGVTM
DYSIFLLHRY EEEKLIEKDN VSAMAIAIEK TIGSISGSSL TTIAGFLALC IMQLSLGKDI
GFVMAKGVIL GLICTITVLP AFILVFDKYI NKFKHKTLLP KFEKSSNFII KHHKIIVLIG
ALLLIPSLIG YKNTDVYYNL DDSLPKDLPS IVSNNKLKTE YNMMSTNIIL INEDLPSYKV
NEMIKELEEV KGVTSVIGLE KIVGERVPES FIPEEFLKKI KNGGYEEIML NSEYKAASEE
VTIQLKEINN IVKKYDKEGL VGGEAPLTND LITIADRDFK MVSIVSIIAI FIIILIIFKS
PTIPVILVLA IELAIYINLG IPYYTKTSIP FIASIVIGTI QLGATVDYAI LLTSRFKEEL
AKNKDKYEAM KISLQGSTIS IVTSALTFFG STAGVGIISD MEMISSLCTL MARGAIISMF
VILFILPGIL LICEKLIVKT SKNFVECVEG GKHNE
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