| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0814 |
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| Symbol | |
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| ID | 4206525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 939695 |
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| End bp | 941050 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565373 |
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| Product | MATE efflux family protein subfamily |
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| Protein accession | YP_698139 |
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| Protein GI | 110801833 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0013446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCATG ACTATATTTT AGGTAAAGAA AAAATTTTCA CTGCTCTAAT GAAATTAAGT
ATTCCGGCAA CCGTAGCTAT GCTTATCAAT GCTATATACA ATATTGTTGA TACAATTTTT
GTAGGTCGTG AAATTGGAGC ATTAGGAATA GCAGGTGTCT CAGTATATCT TCCTTTACAA
ATGATTATGA TGTCCTTGGC ATCATTAATT GGTGTTGGTA CAGCCTCAAT TTTTTCAAGA
AAAATTGGTA ATAATGATTT AGAAGGAGCT AATAAGGCTT TTGGTAATTT AATTCTATTA
GTTTACTTAT TTTCCATATT TACATTTATA TTTGGATTTA TATTTCTTGA GGAACTTGTA
AGATTTCTTG GTGCTAGTAA TGAGGTTTTA CCTTATGCAA TAGATTATGC TAGATCAATA
CTTCCTGGTG TTTTATTTTT CCCAATTTGT GTAGCAGCTA ATAATATAAT AAGAGCCGAA
GGAAGTGCAA AGGATGCTAT GTGTTGTATG TCTATTGGTA TGATCTCAAA TATATTTTTA
GATTATCTAT TCATATGCAA ATTAAACATG GGCATAACTG GAGCTGGTTT AGCAACATCA
ATTTCAAAAT CATTAAGCTT TTCATATTTA ACTTATTATA TTTTAAATAA GTCATCTTTA
AAATTAAAAC TTAAGTATTT AAAATTTGAT TTCTCAATAT TAAAAAAAAT TATTTCTATA
GGAACATCCG CCTTTATAAC TCAAGTATCT ATTAGTTTAG TTGCACTTCT ACTAAATCAT
TCTTTAGTTA AATATGGCGG CAACTTTGCC TTATCTATAT ACGGAATAAT ATATAAACTT
ACCTTATTCA TACAAATGCC ATTATCTGGA CTAGTACAAG GTATGCAACC TATTATTGGA
TTTAGTACTG GAGCCAATAA TATAACTAGA GTTATTAATA CCTTTAAATT AACTTTAATA
ATATCAACCT TTATTGCTAC AACTCTAACA CTAATAATAT TAATAAAAAC TGATATGTTC
ATGAAATTAT TTACAACAGA TATAAATCTA ATAAATGAAG GAAGTAAAGT ATTAAAAAGC
AATATAATTA TGTATCCATT TCTTGGTATA TATCTAACAT CTATTGGCTT CTATCAATCA
ACAGGCAAAG GAAAGGAATC ATTAATTTTG CCTTTACTTA GACAATTTAT TTTCTTTATT
CCTCTTTCGA TAATATTACC ATCATTATTT AATCTTGGTA TATGGGGCAT ATGGTTGGCA
TTTCCTATTT CAGACTTCTT AGCATTCATA TGTACATTAG TAATTGCTAA AATAACCATT
AATAAAAAAG CTATAACCCC TAAAATTATA AATTAA
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| Protein sequence | MNHDYILGKE KIFTALMKLS IPATVAMLIN AIYNIVDTIF VGREIGALGI AGVSVYLPLQ
MIMMSLASLI GVGTASIFSR KIGNNDLEGA NKAFGNLILL VYLFSIFTFI FGFIFLEELV
RFLGASNEVL PYAIDYARSI LPGVLFFPIC VAANNIIRAE GSAKDAMCCM SIGMISNIFL
DYLFICKLNM GITGAGLATS ISKSLSFSYL TYYILNKSSL KLKLKYLKFD FSILKKIISI
GTSAFITQVS ISLVALLLNH SLVKYGGNFA LSIYGIIYKL TLFIQMPLSG LVQGMQPIIG
FSTGANNITR VINTFKLTLI ISTFIATTLT LIILIKTDMF MKLFTTDINL INEGSKVLKS
NIIMYPFLGI YLTSIGFYQS TGKGKESLIL PLLRQFIFFI PLSIILPSLF NLGIWGIWLA
FPISDFLAFI CTLVIAKITI NKKAITPKII N
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