Gene CPR_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0812 
Symbol 
ID4204341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp937577 
End bp938431 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content24% 
IMG OID642565371 
Producthypothetical protein 
Protein accessionYP_698137 
Protein GI110801667 
COG category[S] Function unknown 
COG ID[COG5522] Predicted integral membrane protein 
TIGRFAM ID[TIGR02206] conserved hypothetical integral membrane protein TIGR02206 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000113907 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAT TTGACCATAT TTTGAGTAGC AGGAAACTAC TCAGCATAAT ATTTTTGAGT 
AGGGAGAATA CTTTGAATAG ATTGTTAGAG CTTAGCAATG AAATATTTAG GATAAAAACA
GATGATTATA CTTTCCCGTT ATTTTCATCT TTACATTTTA AGATTATTTT ATGTGTAGTA
ATAACCATAT TTATAGCAAT TATATTTAAA GAAAAAATAA AAAAGTGGAG ATATAGAAGA
GCATTTGAAA TAATTACAGC ACTTATTTTA ATATCAACTC AAATTTTTTT AGCAATATGG
TACTCTAGAT TTCCTAATTT TTATTTGAAG GAAAGTTTAC CTTTGTATCC ATGTAGAATT
GCAATAATTA TGGCAGCAAT AGGTTTAATA TGGAAGAAGA ATGATTTTGC AAAATCAATA
GCTTATTTTT GGGGAACAAT AGGAGCTATA GGAGCATTAA TGATACCTAT TACTAATTCT
TATATTTTTC CACATATAAC TTACTATACA TTTTTTATAG GACATTATTT TTTATTAATA
GCTTCATTAT ATCTAATATT AATAGAGGAA TTTAAAGTGA AAAGTGAGAA TGTAAAACAG
GCACTTATTT TTTCTTTTAT ATTTGCAATT TGTGCTTTTG TAGCAAATTA TTTATTTGAT
GCAAATTATG CCTTTTTAAA TCCTCCAAAT GGATATGAAA TACTTAATCT TATAAATATT
GAAAGTAATA TTATTACAAC ATCAATTTTT GCATATTTTA TTTTTGTATT AGGAATATTC
CTTATGTATT TGCCATTTAA TATTAGTGAT TATAAAAAAG ATAGCTTATT TGAATGTTCC
TTAATTAAAT ATTAG
 
Protein sequence
MDIFDHILSS RKLLSIIFLS RENTLNRLLE LSNEIFRIKT DDYTFPLFSS LHFKIILCVV 
ITIFIAIIFK EKIKKWRYRR AFEIITALIL ISTQIFLAIW YSRFPNFYLK ESLPLYPCRI
AIIMAAIGLI WKKNDFAKSI AYFWGTIGAI GALMIPITNS YIFPHITYYT FFIGHYFLLI
ASLYLILIEE FKVKSENVKQ ALIFSFIFAI CAFVANYLFD ANYAFLNPPN GYEILNLINI
ESNIITTSIF AYFIFVLGIF LMYLPFNISD YKKDSLFECS LIKY