Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0812 |
Symbol | |
ID | 4204341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 937577 |
End bp | 938431 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 642565371 |
Product | hypothetical protein |
Protein accession | YP_698137 |
Protein GI | 110801667 |
COG category | [S] Function unknown |
COG ID | [COG5522] Predicted integral membrane protein |
TIGRFAM ID | [TIGR02206] conserved hypothetical integral membrane protein TIGR02206 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000113907 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATAT TTGACCATAT TTTGAGTAGC AGGAAACTAC TCAGCATAAT ATTTTTGAGT AGGGAGAATA CTTTGAATAG ATTGTTAGAG CTTAGCAATG AAATATTTAG GATAAAAACA GATGATTATA CTTTCCCGTT ATTTTCATCT TTACATTTTA AGATTATTTT ATGTGTAGTA ATAACCATAT TTATAGCAAT TATATTTAAA GAAAAAATAA AAAAGTGGAG ATATAGAAGA GCATTTGAAA TAATTACAGC ACTTATTTTA ATATCAACTC AAATTTTTTT AGCAATATGG TACTCTAGAT TTCCTAATTT TTATTTGAAG GAAAGTTTAC CTTTGTATCC ATGTAGAATT GCAATAATTA TGGCAGCAAT AGGTTTAATA TGGAAGAAGA ATGATTTTGC AAAATCAATA GCTTATTTTT GGGGAACAAT AGGAGCTATA GGAGCATTAA TGATACCTAT TACTAATTCT TATATTTTTC CACATATAAC TTACTATACA TTTTTTATAG GACATTATTT TTTATTAATA GCTTCATTAT ATCTAATATT AATAGAGGAA TTTAAAGTGA AAAGTGAGAA TGTAAAACAG GCACTTATTT TTTCTTTTAT ATTTGCAATT TGTGCTTTTG TAGCAAATTA TTTATTTGAT GCAAATTATG CCTTTTTAAA TCCTCCAAAT GGATATGAAA TACTTAATCT TATAAATATT GAAAGTAATA TTATTACAAC ATCAATTTTT GCATATTTTA TTTTTGTATT AGGAATATTC CTTATGTATT TGCCATTTAA TATTAGTGAT TATAAAAAAG ATAGCTTATT TGAATGTTCC TTAATTAAAT ATTAG
|
Protein sequence | MDIFDHILSS RKLLSIIFLS RENTLNRLLE LSNEIFRIKT DDYTFPLFSS LHFKIILCVV ITIFIAIIFK EKIKKWRYRR AFEIITALIL ISTQIFLAIW YSRFPNFYLK ESLPLYPCRI AIIMAAIGLI WKKNDFAKSI AYFWGTIGAI GALMIPITNS YIFPHITYYT FFIGHYFLLI ASLYLILIEE FKVKSENVKQ ALIFSFIFAI CAFVANYLFD ANYAFLNPPN GYEILNLINI ESNIITTSIF AYFIFVLGIF LMYLPFNISD YKKDSLFECS LIKY
|
| |