| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0810 |
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| Symbol | |
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| ID | 4206407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 935269 |
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| End bp | 936186 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565369 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_698135 |
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| Protein GI | 110803533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00210366 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA TAATGAAAAT GGGTCTTATT CTTAGTGTGT TAATATGTTT AGGGGCTTTT
GTAGGATGTA ATTCACTAAA CAAAAAGCAG GTTGAGGCAA CAGAAAATAA AGAAGCTGTA
GAAACTAAAG ATACAACAAA TGAAAAAAAT ACAGAAGGTA AAGATAAGGC AAAGACAAAT
GAATTAGAGT ATTTACCTTT TGATAAAGAT CCGAATGCTG AGGATGGGAA AGTTGTATCA
GAGTACACTA ATGGTCTTTT AAAGGGAACA TTACAATATC CAGTTAGAAA AGATGGTAAA
AAGATAGTGT ATTTAACTTT TGATGATGGT CCATCAACAA CTAATACACC AGAGGTTTTA
AAGATTTTAG ATAAATATAA TATAAAAAGA ACTTTCTTTG TAACAGGAAA TTCTATAAGT
GCTGGAGATA AATCAAAAGA ATTATTAAAG CAGATTGTTA AAAATGGACA TGCTATAGGA
AATCATACAT ATAGTCACGA TTACAAATAT CTTTATCCTA ATAGAAAGAT GAATGTAAAT
AACATAATGT CAGATATAAA TAAGAATGAA AACTTAATGA AAGAAGTCTT AGGTGAAGAT
TTCTCAACAA AAGTAGTTAG ATTCCCAGGT GGATACTGGT CTTGGCAAGA TAGAACACCT
ATGAAGGAAA AAATGATTCA AGAGGGAATA CAAAACATTG ATTGGAATGC CTTAAATGGA
GATGCAGAAG GAAAAAAGAA AAATGCAGAT GAATTAGTTG AATTTGCTAA GAAAAGTGTA
GAAGACTTAG GCCCTAATGC AGACAATGTA GTAGTTTTAA TGCATGATAC TTATGGAAAA
GAAGAAACAG TTAAGGCTTT ACCAAGAATA ATAGAGTACT TACAAAGCAA AGGCTTTGAA
TTTAAGAGCA TTAAATAA
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| Protein sequence | MKKIMKMGLI LSVLICLGAF VGCNSLNKKQ VEATENKEAV ETKDTTNEKN TEGKDKAKTN
ELEYLPFDKD PNAEDGKVVS EYTNGLLKGT LQYPVRKDGK KIVYLTFDDG PSTTNTPEVL
KILDKYNIKR TFFVTGNSIS AGDKSKELLK QIVKNGHAIG NHTYSHDYKY LYPNRKMNVN
NIMSDINKNE NLMKEVLGED FSTKVVRFPG GYWSWQDRTP MKEKMIQEGI QNIDWNALNG
DAEGKKKNAD ELVEFAKKSV EDLGPNADNV VVLMHDTYGK EETVKALPRI IEYLQSKGFE
FKSIK
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