Gene CPR_0788 details

Gene Information

• Locus tag: CPR_0788
• ID: 4206396
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 912663
• End bp: 914537
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 642565347
• Product: sensory box protein/histidinol phosphate phosphatase family protein
• Protein accession: YP_698113
• Protein GI: 110803561
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG1387] Histidinol phosphatase and related hydrolases of the PHP family; [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain; [TIGR01856] histidinol phosphate phosphatase HisJ family

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0208583
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACT ATTATTTAGA AGAGGTTGTG GATGAAATTT ACTATAAAGA AGGTAAAGAA 
AATAGAGAAC TAAAAATGGA TATTTTAAGT TTAAAGATAA AAAATGAATT AAATATCATA 
GAAAATTTAT GTGGTAATTG TAAAAGAAAA AGTAATTTAT ATGAAGCTAT AAAGAATGTA 
AAAAGCTTAT TAAAACAGTA CTATATAGTT TTTAATGGAA CTCAAGATGC ATTATTTTTA 
GTTGAAATGC TTAAAGATGG AAATTTTAAA TATGTAAGAA ATAACAATGC ATATCTTCAG 
GATTTTGGAC TTAAAGGAGA AGAAATTATA AATAAAACAC CAAAGGATGT TTTCGGGGAA 
GAACTTGGAC AAAGATTCTG CAATTATTAT AAAAAATGCA TAGAGAATAA AAAAGTAATT 
GTATTTGAAG ATGATTTGTC TTTAAATGGT AAGAAAAGAG TGTTCTTAAC GAAACTACTT 
CCTATTATTG ACGAGGATGA TGGTGTTTTT ATAGTAGGTT CAAGAGAAGA TATTACAAAG 
AGAAAAGAAA TGGAAATAGA GTTAGACAGA ATGGCTAATT ATGATGAATT AACTAATATT 
CCAAATATGA GATTATTTTT TAAATCTTTT GGAAATACAA TAAATGAAAG TAAAAAGAAA 
GGAAAGAAGT TTGCAGTTCT TTTTATAGAT TTAGACTGGT TTAAGGAAAT AAATGATAAC 
TTTGGACATG ATGTAGGGGA TGAGGTTCTA GTTTGTGCAG TTAAAAGAAT ATATAAATGT 
TTAAGGAAGG GCGATATTTT AGGAAGAATA GGCGGAGATG AATTTGCTGC TATACTAAAG 
GATATAAGTG ATAAAGAAGA AATTGAAAAA ATAGTTAAAG ATATTCAAAA CTACCTAAGA 
AAAAGAATAA AAATAGGGGA TGTTACATGT AATATTGATT CATCCATAGG TATAACAATA 
TTTCCAGAAG ACGGAGAAAA AATAGAAGTA CTTATGAGAA ATTCTGATAA GGCTATGTAT 
AAAGTAAAAA ATAGAGAAAA GGGAGGATAT AGATTTTTTA ATAATATGAT TAGAGAATAT 
AACTTTAAAA ATAAAGATGG TCATGTACAT ACAAAATACT GTCCTCATGG TAGTGATGAT 
AATATTGAAG ATTATATTGA AGAAGCTATA AAATATAAAT TAGATGAAAT AAGTTTTTTA 
GAGCATCTTC CTCTTCCTGA AAGTTTTATT GATCCTTCAC CTTTAAAAGA TAGTGCTATT 
AAATTAGAAG AAATGGAATC ATATTTAAAA GAAGGAAATA AATTGAGAGA GGGATATAAA 
AGTAAGATAA AAGTAAATGT TGGAGTAGAG GTAGACTATA TAGAAGGTTA CGAGATTGAA 
ACAGAATTGC TTTTAAATAA ATATGGAAAA CACTTAAATG ACAGTATTTT ATCCGTTCAT 
ATGATAAAAG GAAATAAAAG ATATTATTGT ATAGATTTTA GCGAAAGTGA ATTTAAAAAG 
ATCATAGATG ATTTAGGTTC TTTAGAAAAG GTATATGATA AATATTATGA TACATTAATT 
ATGGCCTTAA AAAGTGATTT AGGACCATAC AAACCAAAAA GAATAGGTCA TTTAAATCTA 
GTAAGAAGAT TTAATAAGGA GTTTCCATAT AATTATGAAA AACATATTTC AAAGATAGAG 
AAAATATTAG ATATTATAAA AGAAAAAGGC TATGAGCTTG ATTTTAACAT TGCAGGCTTA 
AGAAAAAAAG AATGTAATGA ATTTTACATA GAAGGAAAAG TCTTAGAAAT GGCAATTGAG 
AAAGATATAC CTATGGTTTT AGGAAGTGAT TCTCATTCTG CTAAATATAT AAAATGTATA 
AAAGAGTTTT TATAA 

 

Protein sequence

MKNYYLEEVV DEIYYKEGKE NRELKMDILS LKIKNELNII ENLCGNCKRK SNLYEAIKNV 
KSLLKQYYIV FNGTQDALFL VEMLKDGNFK YVRNNNAYLQ DFGLKGEEII NKTPKDVFGE 
ELGQRFCNYY KKCIENKKVI VFEDDLSLNG KKRVFLTKLL PIIDEDDGVF IVGSREDITK 
RKEMEIELDR MANYDELTNI PNMRLFFKSF GNTINESKKK GKKFAVLFID LDWFKEINDN 
FGHDVGDEVL VCAVKRIYKC LRKGDILGRI GGDEFAAILK DISDKEEIEK IVKDIQNYLR 
KRIKIGDVTC NIDSSIGITI FPEDGEKIEV LMRNSDKAMY KVKNREKGGY RFFNNMIREY 
NFKNKDGHVH TKYCPHGSDD NIEDYIEEAI KYKLDEISFL EHLPLPESFI DPSPLKDSAI 
KLEEMESYLK EGNKLREGYK SKIKVNVGVE VDYIEGYEIE TELLLNKYGK HLNDSILSVH 
MIKGNKRYYC IDFSESEFKK IIDDLGSLEK VYDKYYDTLI MALKSDLGPY KPKRIGHLNL 
VRRFNKEFPY NYEKHISKIE KILDIIKEKG YELDFNIAGL RKKECNEFYI EGKVLEMAIE 
KDIPMVLGSD SHSAKYIKCI KEFL