Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0779 |
Symbol | |
ID | 4204577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 904115 |
End bp | 905119 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565338 |
Product | iron compound ABC transporter, permease protein |
Protein accession | YP_698104 |
Protein GI | 110802425 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.100059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA TTATAAATAA CAATAAGACA AAATTTTTCT TACTTTTATT TTTAATAATA TTAACAGGAA TTCTATGCTA TTTAAGCATT ACTAAAGGAT TTATAAAAAC TAATTATGAA ACTGTTATAG ATGCTTATAA AAATTTTAAT GGTTCTCAAG AGCACATAAT TATAAAAACA TCTAGAGTTC CTAGAACTTT AAATGCTCTT TTAGTTGGAG GAGCACTTGG TGTTTCTGGG CTTTTGATAC AAGCATTAAC TAAAAACAAA CTTGCTTCTC CTAGTATATT AGGTATAAAT TCGGGAGCAG TATTTATTTT GGTTATTGCT ATAACATATA TTCCACAAAT TTCTAACATG GGACTTGCAT GCTTATCTTT TATAGGGGCA TTAGGAGCTA CTATATTGGT ATATATATTG TCAGGTGGAC TTTCTGGTGA AGTTCGAACT ATGGACTTAA CATTAGGTGG AGCAGCTTTA AGTGCCTTGC TTTTCTCTTT AACTCAAGGA ATATTATATA AAAATGATAT TGCTTTAGAA GAAATTATAT ATTGGATGAC TGGTTCCGTA GAAGGTAAAA AAATAGATAT GATACTTAAA TTTTCACCAG TAATAATAGT TACTATAATC TTAACATTCT TTATTTGGAA AAAGCTTAAT GTATTTTCTT TAGGTGAAGA AATGGCAAGG TCATTAGGAA TAAAAACTTT GTATTTAAAA ATATTAATAA TAGCTATAGT ATCAGTTTTA TCAGGAGTAT CTGTAGCACT TGCTGGACCC ATAGCATTTG TTGGGTTAGT AACTCCAAGT ATGGTGCATA AATTTATTGG TTCAGATTAT AAATGGCTTA TTCCTTTCTC TGTGTTTACT GGGTCCTCTA TATTATTATC AGCGGATATA TTATCAAGAT TTATAATTTA TCCTAAAGAA GTACCAGTAG GAGCATTAAC TGCTCTTATA GGAGGACCAT TCTTTATATA TATTGCTAAA AGGAGGGGTA AGTAA
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Protein sequence | MEKIINNNKT KFFLLLFLII LTGILCYLSI TKGFIKTNYE TVIDAYKNFN GSQEHIIIKT SRVPRTLNAL LVGGALGVSG LLIQALTKNK LASPSILGIN SGAVFILVIA ITYIPQISNM GLACLSFIGA LGATILVYIL SGGLSGEVRT MDLTLGGAAL SALLFSLTQG ILYKNDIALE EIIYWMTGSV EGKKIDMILK FSPVIIVTII LTFFIWKKLN VFSLGEEMAR SLGIKTLYLK ILIIAIVSVL SGVSVALAGP IAFVGLVTPS MVHKFIGSDY KWLIPFSVFT GSSILLSADI LSRFIIYPKE VPVGALTALI GGPFFIYIAK RRGK
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