Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0772 |
Symbol | |
ID | 4206178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 899011 |
End bp | 900162 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565331 |
Product | ISCpe2, transposase orfB |
Protein accession | YP_698097 |
Protein GI | 110803733 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA AAGCATATAA ATTTAGAATA TACCCAACTA AGAAACAAGC CGAGCTAATT AACAAGACTA TTGGATGTTG TAGGTTTGTA TTCAACTATT CTTTAGGTGT TCAAAAAACT AAAGATAATT ATTGGAATAT AGTTGAGGAG ATGGTTCAAC AAGGCTACTT CCAAGAGAAT AATTGGAAAG GCGAGTTCTT TAATAAAGCC AATTCAATTA AAGATATAGC TAAATTAAAG AAAAGCTATG ATTGGCTTAA AGAAGTAGAT AGCATAGCAC TACAGGCTTC TGTTGAAAAT CTTGGTGCTG GATATGATAA GTATTACAAA AAAAAAGGTG GCAGACCTAA ATTTAAGTCT AAGAAAAATG AAATACAATC TTATACTACT AAATTAGTAA AAGCTAAAGG TAATGTAAAT ATTGAGATAG TAGGTAAAGG AATTAAACTA CCTAAACTTG GATTAGTTAA GATAGAAAAT TCAAGAAATA TAGATGGAAA TATTAAAAGA GTTACTGTGA ACAGAACACA ATCTGGTAAA TATTTTGCAT CTATTCTTTG TGATGTAAAT ATTCAAGAAT TACCTAAAAT AGATAAAAAA GTTGGTGTAG ATGTTGGACT AAAAACTTTT GCTGTTTGTT CTGATGGATA TGAAGAAGCT AATCCTAAAC ACTTTAGAAA GGCAGAAAAA AGACTTATTA AACTTCAAAG AGATTTAGCT CGTAAAGAAT ATAACTCTAA AAACTATCAC AAAAATAGAA TTATGATTGC TAAATTACAT GAAAGGATAG CAAATCAAAG AATGGACTTC TTACAAAAAT TTTCAACTAA GCTAATTAGA GAAAACCAAT CAATAGCCAT TGAAGATTTA AGAGTTTCAA ATATGCTTAA AAACCACAAA CTTGCTAAAG TAATTTCAGA AGCAAGTTGG TCAGAATTTA GAAGAATGCT AGAATATAAG GCTGAATGGT ATGGTAGAAA AATAGTAATT GCTCCACCAG ACTATGCAAG CTCTCAACTA TGTTCTGAAT GTGGCTATAA GAATATAGAA GTTAAAAACC TAGGTCTAAG AGAATGGGTA TGTCCCGAAT GTGGAACACA CCAGCAAAGA GACCTTAATG CTTCAATAAA CTTGGAAAAG CTGATAGCTT AA
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Protein sequence | MRKKAYKFRI YPTKKQAELI NKTIGCCRFV FNYSLGVQKT KDNYWNIVEE MVQQGYFQEN NWKGEFFNKA NSIKDIAKLK KSYDWLKEVD SIALQASVEN LGAGYDKYYK KKGGRPKFKS KKNEIQSYTT KLVKAKGNVN IEIVGKGIKL PKLGLVKIEN SRNIDGNIKR VTVNRTQSGK YFASILCDVN IQELPKIDKK VGVDVGLKTF AVCSDGYEEA NPKHFRKAEK RLIKLQRDLA RKEYNSKNYH KNRIMIAKLH ERIANQRMDF LQKFSTKLIR ENQSIAIEDL RVSNMLKNHK LAKVISEASW SEFRRMLEYK AEWYGRKIVI APPDYASSQL CSECGYKNIE VKNLGLREWV CPECGTHQQR DLNASINLEK LIA
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