Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0765 |
Symbol | |
ID | 4205588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 893517 |
End bp | 894068 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 18% |
IMG OID | 642565325 |
Product | hypothetical protein |
Protein accession | YP_698091 |
Protein GI | 110803348 |
COG category | [S] Function unknown |
COG ID | [COG1300] Uncharacterized membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000146794 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGATA TTATTTTAAG AGATATAAAA AGAAGTTTTT TATTAATTAA TATTATATAT ATATTATTTT TTTTATTAGG ATTTTTTTTT AGTGACTATT TTAAGGAGAT ATTTAATGAT GGTTACATTT TTAATCCTGA AAATATTCAG ATAGATAGTA ATAAGCATAT ATTCGTTGAT ATATTTAATA ATAATATAAG ATTAGGTATT AAAATCTCAT TTGGAGTAAT AACATTAGGA CTAAGTAGTA TTTTTTTTAT AATATTAAAT GGCTTCTTTT TTGGAATTGT TTCTAATTTT GCTATAAATA TTTATTCGTT AAATTATTAT TTAAGATTAA TAGTTTTTCA TGGAATCATT GAGATATTAA CTTTTAATCT ATTAGCAACT GCTACAATAA TACCTTTAAT ATTTATAAAA AATAAAATTA AAAATAAGAG ATTTAAAATA TCAGAATATT TTAAAAGTTA TTTATTTTTA ACATTTTTAG GTTTAGTGTT AATTTTAATT TGTGCATTGA TTGAATCATT TGTGTCTACG CTTATGTTAT AG
|
Protein sequence | MSDIILRDIK RSFLLINIIY ILFFLLGFFF SDYFKEIFND GYIFNPENIQ IDSNKHIFVD IFNNNIRLGI KISFGVITLG LSSIFFIILN GFFFGIVSNF AINIYSLNYY LRLIVFHGII EILTFNLLAT ATIIPLIFIK NKIKNKRFKI SEYFKSYLFL TFLGLVLILI CALIESFVST LML
|
| |