| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0753 |
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| Symbol | |
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| ID | 4204280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 884376 |
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| End bp | 885074 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565313 |
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| Product | scdA protein, putative |
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| Protein accession | YP_698079 |
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| Protein GI | 110803486 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG2846] Regulator of cell morphogenesis and NO signaling |
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| TIGRFAM ID | [TIGR03652] iron-sulfur cluster repair di-iron protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00120988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TAATTAGAAA AGATTATAGT TTAGGAGAAG TTGTTACTGT TTACCCAGCA
GTTGTTAAGA AATTTAATGA TATGGAATTA GATTATTGTT GTGGTGGAAG TAAGAGTTTA
GAAGTAGCAC TTAAAGAAAA AGGTGTTGAT GTTGATAAAT TTGTTGAAGA TTTAAATAAA
GAATTCAAAG AGTTTAAATT TGAAAATTCT CAATATGTAG ATTGGAGAGA AAAATCTTCA
GAAGAGTTAA TAAGTCATAT AGTTGAAACT CATCATGGAG AGACTTTTAG ATTATTAAAA
GAAATAGATC CATTGATGGT TAAGGTATTT AGAGTGCATT TTTCACATGA TCCAGAACTT
TTAATGAAAG TTCATAGCCT TTTTGGAAAG CTAAAATGTG AATTAGAAGA ACATTTACTT
AAAGAAGAAA ATATTTTATT CCCACTAATG ATTAAGTATG ATAAAGCAAA GAATGAAAAA
GAAAAGAAAG AAATAGAAGA GGATATAAGA ATCATAGTTA ATGAACATGA AGCTGCTGGT
GACATATTAA AAGAATTAGC AGAAGTAACT GATGATTATA AAGTTCCAGA GTGGGGATGC
ATAAGTTTTA AACTACTATA TGATTATTTA CACGACTTAG AGAAAGATTT ATTCATACAT
ATTCATAAAG AAAATAATAT ATTATTCCCA AGATATTAA
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| Protein sequence | MEKLIRKDYS LGEVVTVYPA VVKKFNDMEL DYCCGGSKSL EVALKEKGVD VDKFVEDLNK
EFKEFKFENS QYVDWREKSS EELISHIVET HHGETFRLLK EIDPLMVKVF RVHFSHDPEL
LMKVHSLFGK LKCELEEHLL KEENILFPLM IKYDKAKNEK EKKEIEEDIR IIVNEHEAAG
DILKELAEVT DDYKVPEWGC ISFKLLYDYL HDLEKDLFIH IHKENNILFP RY
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