Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0752 |
Symbol | |
ID | 4205346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 883384 |
End bp | 884196 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565312 |
Product | hypothetical protein |
Protein accession | YP_698078 |
Protein GI | 110803011 |
COG category | [S] Function unknown |
COG ID | [COG2461] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00690211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA AAAAAGTAGT ATTAAAAGAT GGACAAGCAA AGGTTATTGA TTCTGAAAGA ATAAACATGT TAACTGACTT TTTAAGAAGA ATAAATAAAG AAGGTATAAC TAAAGAATTA AGAGAAGAAG GATTAGATAT AGTAAAGTCA ATTGATCCAT TAGAATTATC AATTGCAGAA CAAAACTTAA TAGATGATGG AATGGAACCT AGTGAGTTAA GACATTTATG CGATATACAT ATGGAAATAC TTAAGGATGA ACTTGAAAAG TTAAAGAGCA ATATATCAAG GGGACATGTC TTAGATACTT TAGTTGAAGA GCATACAAAA ATATTAGGAT TATTAGAAGA ACTTGAAATA GTTACTAGTA AAATGGTAAA AATGGATAAA TATAATAAAG AAAATGCAGA ATTTTCAAAG GCTTTAGAAA TAGTACAAGG TATTTTAGAT GCAGAGCTTC ATCATAAAAG AGAAGAAGAT GTATTATTTC CAGAGTTAGA AAAGAGAGAG ATTACTGGTC CAACAAGAAT AATGAGATTA GAACATGATC AATTAAGAGA GAAAAAGAGA AGATTAAAAG AATTAATAAA AGTAGTTGAA TATCTTGATT TTGAAGACTT TAAAGATAAT CTTCAATCTT TATCTAAAGA AATTTGTTTT GAACTTAAGG ATCATATATT TAAAGAAAAT TATATTTTAT ACCCAACAGC TTTAGAGGCT ATAAAAGATG AAAAACTTTG GGAGAATATG AGAGAGAAAT GTGATGACAT AGGATATTGT CCATTTACTC CAAAAGAATG TATAAAAAAA TAG
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Protein sequence | MENKKVVLKD GQAKVIDSER INMLTDFLRR INKEGITKEL REEGLDIVKS IDPLELSIAE QNLIDDGMEP SELRHLCDIH MEILKDELEK LKSNISRGHV LDTLVEEHTK ILGLLEELEI VTSKMVKMDK YNKENAEFSK ALEIVQGILD AELHHKREED VLFPELEKRE ITGPTRIMRL EHDQLREKKR RLKELIKVVE YLDFEDFKDN LQSLSKEICF ELKDHIFKEN YILYPTALEA IKDEKLWENM REKCDDIGYC PFTPKECIKK
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