| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0751 |
|---|
| Symbol | |
|---|
| ID | 4206298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 881451 |
|---|
| End bp | 882830 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642565311 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698077 |
|---|
| Protein GI | 110803619 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0683587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA TCTTAGGTTT AATATTATCC TTAATACTTA TAATGTATCT TGCTTATAAA
GGGTACTCAA CAATAATAAC AGCTCCCATT GTAGCATTAG TAACTATACT TATTACTACT
GGGTTAGATG CACATTTAAT GGCTAGTTAC ACTGAAATAT ATATGTCTGG CTTTGCAAGT
TTTATAAAAA ATTATTTTCC TCTTTTTATG ACAGGAGCAA TTTTTGCAAA GTTAATGGAA
GAGGTAGGTT ATGCTAAATC TATAGCTCAC TTTATAACTA AAAAACTTGG AAAAGAAAAA
TCAATATTAG CCGTTGTTCT TTCTGGAGCA TTGCTTACTT ACGGTGGTGT TTCCTTGTTT
GTAGTAGCAT TTATTCTTTA TCCAATTGCC ACTACATTAT TTAGAGAAGC TGATATTCCT
AAAAGACTTA TACCTGGAAC AATAGCTCTT GGAGCATTTA CTTTTACAAT GACTGCTCTG
CCAGGTTCAC CAGAAATTCA AAATGTTATA CCAATGAAAT ATTTTGGTAC AGATACTTTT
GCAGCACCAC TTATAGGATT ATTAGCAAGT ATTATGATGC TAACTCTTGG TATGATATGG
CTTACACGAC GTGCAAAATC AGCTAAAGCT AAGGGGGAGG GATATGGAAA TCATAATGAT
TCAATAGTTA ATGAAAACTA TGAAAACTTA CCTAGTATAT TTAAAGCAAT AATTCCTATA
ATAATAATTT TTATAGTTAA CTTATTCTTT TCAAAAGTTT ACTATGAAAA TATAGACGGA
AGTTATCTTA AAGAATTTAA TACCACTTTA AGTAATGTTT CTGGAACTTG GAGTGTAATA
ATTGCTATAG TTTTAGCAGA CTTATTTTTA ATAATAACTA ACTTTAAAAA AATAAAAAAC
TTAAAATCAG TATTAGATAA AGGAGTTACT AACTCATTTA AACCACTATT AAATTCTAGT
GCCATAGTTG GATATGGAAG TGTAATAAAA TCACTAGCTG TGTTCACTCT TATACAATCA
GTTATATTTG GCGTTTCATC AAACCCAATA ATCTCTGAAG CTTTATCGGT TAACTTAATA
TGTGGACTTA CAGCCTCAGC CTCTGGAGGA CTTGGAATAT CTTTAGATGC TCTTGCTCCA
ACATACTTAC AAATGAGTCA GGCTATGAAT ATTTCACCAG AAATACTTCA TAGAATAGCT
TCTCTATCTT CTGGAGGGTT AGATACTCTT CCTCATAATG GAGCAGTTAT TACTACTTTA
GCCATTTGTA GTTTAACTCA TAAAGAAGCA TACAAGGATA TGTTTGTAAC CTCTGTCCTT
ATTCCTATAT TTACAACAGC TGTAATAGTC TTATTAGTTT CTATGAAATT TGCTGTTTAA
|
|---|
| Protein sequence | MTNILGLILS LILIMYLAYK GYSTIITAPI VALVTILITT GLDAHLMASY TEIYMSGFAS
FIKNYFPLFM TGAIFAKLME EVGYAKSIAH FITKKLGKEK SILAVVLSGA LLTYGGVSLF
VVAFILYPIA TTLFREADIP KRLIPGTIAL GAFTFTMTAL PGSPEIQNVI PMKYFGTDTF
AAPLIGLLAS IMMLTLGMIW LTRRAKSAKA KGEGYGNHND SIVNENYENL PSIFKAIIPI
IIIFIVNLFF SKVYYENIDG SYLKEFNTTL SNVSGTWSVI IAIVLADLFL IITNFKKIKN
LKSVLDKGVT NSFKPLLNSS AIVGYGSVIK SLAVFTLIQS VIFGVSSNPI ISEALSVNLI
CGLTASASGG LGISLDALAP TYLQMSQAMN ISPEILHRIA SLSSGGLDTL PHNGAVITTL
AICSLTHKEA YKDMFVTSVL IPIFTTAVIV LLVSMKFAV
|
|---|
| |