| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0749 |
|---|
| Symbol | |
|---|
| ID | 4205752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 877076 |
|---|
| End bp | 877915 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642565309 |
|---|
| Product | lactose operon transcriptional activator |
|---|
| Protein accession | YP_698075 |
|---|
| Protein GI | 110802593 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0693788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAT TGTGGAAAAA GTATGTTAAA GAAAACTTTG AAATGAATGT AGATGAATGT
GGTATAGAAC AAGGTATACC AGGATTAGGA TATAACTATG AAGTATTGAA AAATGCTGTT
ATTCATTACG TAACTAAGGG ATATGGGACT TTTAAATTTA ATGGTAAAGT ATATACCTTA
AAACAAGGTG ATATTTTTAT ACTACTAAAA GGTATGCAAG TTGAGTATGT GGCTTCTATT
GATGACCCTT GGGAATATTA CTGGATAGGC TTTAGTGGCT CAAATGCTAA TGAATATTTA
AATAGAACTT CTATTACTAA CTCCTGTGTT GCTAATTGTA AAGAAAACTC AAAAATTCCA
CAGATAATAT TAAATATGTG CGAAATATCA AAAACTTATA ATCCTTCAAA ATCTGATGAC
ATACTATTAC TAAAAGAACT TTACTCATTA TTGTACACAC TTATAGAAGA ATTCCCAAAA
CCTTTTGAAT ACAAAGATAA GGAATTACAC ACATATATTC AAGATGCCCT TAATTTCATT
AATTCTAATT ATATGCATAG CATAACTGTT CAAGAAATTG CTGATTATGT AAACTTAAGC
AGAAGTTATT TATATAAAAT GTTCATAAAA AACCTTGGAA TTTCTCCTCA AAGATATTTA
ATAAACCTTA GAATGTACAA AGCCACTCTT TTATTAAAAG GCACTAAACT TCCTATAGGT
GAAGTTGCAA GTAGTGTAGG CTATAGTGAC TCACTGTTAT TTTCAAAAAC TTTTTCAAAA
CATTTTTCAA TGTCCCCACT AAATTACAGA AATAATCAAG TAAATAAAAC AAGTATATAA
|
|---|
| Protein sequence | MQILWKKYVK ENFEMNVDEC GIEQGIPGLG YNYEVLKNAV IHYVTKGYGT FKFNGKVYTL
KQGDIFILLK GMQVEYVASI DDPWEYYWIG FSGSNANEYL NRTSITNSCV ANCKENSKIP
QIILNMCEIS KTYNPSKSDD ILLLKELYSL LYTLIEEFPK PFEYKDKELH TYIQDALNFI
NSNYMHSITV QEIADYVNLS RSYLYKMFIK NLGISPQRYL INLRMYKATL LLKGTKLPIG
EVASSVGYSD SLLFSKTFSK HFSMSPLNYR NNQVNKTSI
|
|---|
| |