| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0746 |
|---|
| Symbol | |
|---|
| ID | 4205145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 873366 |
|---|
| End bp | 874565 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 642565306 |
|---|
| Product | ISCpe4, transposase |
|---|
| Protein accession | YP_698072 |
|---|
| Protein GI | 110803218 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.113079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TGAAAAGGGC TTACAAGATG GAGATTAATC CTACTGATGA ACAAAAGTCT
AAAATACACC AAACTATTGG TGTATCAAGA TTTGTCTATA ACTTTTATAT TGCTCGTAAT
AAAGAAATTT ATGAGAGAGA AGGAAAGTTT GTTAGTGGAA TGGATTTTTC AAAGTGGTTA
AATAATGAGT ATATTCCCAA TAATCAAGAT AAAAATTGGA TTAAAGAAGT ATCTTCAAAA
GCTACTAAAC AAGCTATTAT GAATGGAGAT AAAGCTTTTA TAGATTTCTT TAAAAAAGCT
AAGGGTTTTC CAAAATTTAA GAAAAAGAAA AATCAAGATG TAAAAGCTTA TTTTCCTAAG
AATAATAAAA CTGATTGGAC TTTAGAAAGA CATAGAGTAA AAATACCAAC ACTTGGATGG
GTAAGATTAA AAGAATTTGG TTATATTCCT GTAAATTTAA TAATCAAAAG TGGTACAGTA
AGTCAAAAAG CTGATAGATA TTATGTATCT ATATTGGTTG AAGAAAGAGA TATAAAAATA
TCTAATTCAA ATACAGGTAT GAAAATATCT AACACAAATA ATGAAGGCTT AGGAATTGAT
CTAGGTATTA AGGAATTTGC TGTATGTAGT GATGGAATTA AGTTTAAAAA TATAAATAAA
ACATCTATTA TTAAAAAAGT AGAAAAGAAT TTAAAAAGAG AGCAAAGAAA ACTTTCAAGG
AAATATGAAA GTTTAAAAAT AAGAAATAAA AAAGAAAAAG GAGGAAATGT TACTCGTCAA
AATATTCAAA AACAAATAGT CAAAGTACAA AAACTTCATC AGAGATTAAC AAATATACGA
ACTGATTATA TAAATAAAAT AGTATCTTCG ATTATAAAGC AAAAACCAAG CTATATAACA
ATTGAAGATT TAAATGTTAA AGGAATGATG AAGAATAAGC ATTTATCTAA AGCTATTGCA
AGTCAGAAGT TCTTTGAATT TAAAACTAAA CTAATGTCTA AGTGTAAGCA AAATGATGTG
GAACTTAGAA TAGTTGATAG ATTTTATCCA TCATCAAAGA CTTGTAGTCA ATGCGGAAAG
GTTAAGAAAG ATTTAAAACT ATCTGATAGG ATTTATAAAT GCAATTGTGG ACTTACTATT
GATAGAGATT TAAATGCAAG TATTAATCTT AAAAATGCTA AAAAATATAA GATAGCTTAA
|
|---|
| Protein sequence | MKKLKRAYKM EINPTDEQKS KIHQTIGVSR FVYNFYIARN KEIYEREGKF VSGMDFSKWL
NNEYIPNNQD KNWIKEVSSK ATKQAIMNGD KAFIDFFKKA KGFPKFKKKK NQDVKAYFPK
NNKTDWTLER HRVKIPTLGW VRLKEFGYIP VNLIIKSGTV SQKADRYYVS ILVEERDIKI
SNSNTGMKIS NTNNEGLGID LGIKEFAVCS DGIKFKNINK TSIIKKVEKN LKREQRKLSR
KYESLKIRNK KEKGGNVTRQ NIQKQIVKVQ KLHQRLTNIR TDYINKIVSS IIKQKPSYIT
IEDLNVKGMM KNKHLSKAIA SQKFFEFKTK LMSKCKQNDV ELRIVDRFYP SSKTCSQCGK
VKKDLKLSDR IYKCNCGLTI DRDLNASINL KNAKKYKIA
|
|---|
| |