Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0744 |
Symbol | |
ID | 4206305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 870668 |
End bp | 871621 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565304 |
Product | hypothetical protein |
Protein accession | YP_698070 |
Protein GI | 110803626 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00634818 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGGGA AGAAATTAAG TGTTTTGGGA GTTAGCTTAA TAATAAGTTT TTTAATTTAT ATTGTTTATT TGGTTTCAAG CAATATTTTA TTAAACTATG GTATGGAGTT TAGAGAAAGT GTTAAGAATT TTATACTTTT AGATAAATTT GTATTTATAG CTTTTGGTAA TATAATATTT ATTAAAATAA TTTGGAAAGA GAAAGGAATA GGGGGATTTG CTAAGACGTT TACTACATTT TTATCTTTTA TAATAAGTTT TGTTTTAATA TTTGGTTTTA TTTTAATACC TTATGTTTTT GAGTCAAGAG TGGAAGCTTT AGCATATAAA GAAGGAAGAT TAGTAGTAGC TGCTTCTAGT GATGGATTAC ATAATTCAAG GATAAGTTTT TATGAACCTG TAAATTCTAT TGTTATGAAA AATAGTGATA TTGAAGATTT ACATCATAAT GCTCCTAACA ATTGTTATTA TTATGAAAAA TCCAACTTTT TAGAAAATCC TGATTTTGAT ATAAGGGAAG AATCTAATTT TGAGGATTTA AAGCCATGGA GTGCAAAGAA AAAATTTAGC CATGAAGTGT TTAATTATTT AGGAAACAAA ACTTATGATT TTGGGGGTAT AGTAATTAAA TTTGATAAAA AAGAAACCTT GGTGAAAGAA GCTTCTATAG AAAGAAATAT AGTTAAGTAT GAGGGTGTAA ATATAATAGG TGAAAATATT GATACTATTA AAGAAAATAT AAGTAAAGCG GAGAAAGATC ATGATGACAG TACTATATAT GAAGAATTTT TAGATGAAAA AGGTAAGCAA AATATTAGAA TTGGTAGAAA ATATAGATTT AATACTAAAG ATGAGTATAG CATATATTAT TATGATACAA CTCTAGTTCT TGATGATAAT GGCATAGTTA CTTCAGTTAA ATATTTAAAT AGGAATTTTG AAGATATAGA TTAA
|
Protein sequence | MKGKKLSVLG VSLIISFLIY IVYLVSSNIL LNYGMEFRES VKNFILLDKF VFIAFGNIIF IKIIWKEKGI GGFAKTFTTF LSFIISFVLI FGFILIPYVF ESRVEALAYK EGRLVVAASS DGLHNSRISF YEPVNSIVMK NSDIEDLHHN APNNCYYYEK SNFLENPDFD IREESNFEDL KPWSAKKKFS HEVFNYLGNK TYDFGGIVIK FDKKETLVKE ASIERNIVKY EGVNIIGENI DTIKENISKA EKDHDDSTIY EEFLDEKGKQ NIRIGRKYRF NTKDEYSIYY YDTTLVLDDN GIVTSVKYLN RNFEDID
|
| |