Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0739 |
Symbol | |
ID | 4205589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 865160 |
End bp | 866086 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565299 |
Product | integral membrane protein |
Protein accession | YP_698065 |
Protein GI | 110803349 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0224771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA AAGGAATTAT TTTAACTATG CTATCTTCAA TTACCTTTGG TTTTGCCTTT ACACTTGGGC CAATGACCTA TGGTCTTGAA GGAAGCAACC CTGTGACATT AACTTTTTTA AGAAATTTTT TAAGTTTGCC ATTTTTATTA GTAATTATTT TACTTTTAAA AATAGATTTA AGAGTAACAA AGAAACAACT AAGAGATCTA ATAATACTTG GTTTTGTTGG AAATGCAATA ACAACTTTAA TGTTAAATAT GGCATTTGCT TGTATAGATG TTGGAATAGT TACACCTATA CATTTTACTT ACCCAATATT TGTAACATTA GGCTGTGTAA TATTCTTCCA CGAAAAATTA AGTAAACAAA AAGTCTTTGC ATTAATTATT GCTATGTCAG GTATAGGATG TTTCTTTATT ACAGCGTTAA ATTCAGCATC TTTTGGAAAA AGTACATTGT TAGGATTAAT TTTAGCCGTA GCATCTGGAA TTTTCTATGC ATTTTATATT ATATTTATGG ATAAAAGTGG TTTGAAAAGT GAGCCACCTT TTAAAATAAC ATTCTATGTA GCGATAGCTT CAACAGTAGG TATGTTTATT TATGGAATGC TTACAAAGGA ACTTGTATTA TCTTCATTGA CACATAAAGC ATGGGGATTA TCAGCAATAT TTGCTTTCTT ATGTACAGTT GTAGCATTAT CATTATTACA AGTGTGTATA AAATATATTG GTGCTAGTGA AGCTGCTGTT ATAAGTACAT TTGAACCTAT AACAAGTGTT ATCTTTGGAG CAATACTTTT AGGTGAAGAA ATAACATTAA TGAAAATAAT TGCATGTTCA TTAATATTTG CAGGAGTATT AATACTGTCC TTTGCAAAAG AAAAGACAAA ATCTAATATT AAAATAAAAG AATCAGTTAC CAATTAA
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Protein sequence | MKLKGIILTM LSSITFGFAF TLGPMTYGLE GSNPVTLTFL RNFLSLPFLL VIILLLKIDL RVTKKQLRDL IILGFVGNAI TTLMLNMAFA CIDVGIVTPI HFTYPIFVTL GCVIFFHEKL SKQKVFALII AMSGIGCFFI TALNSASFGK STLLGLILAV ASGIFYAFYI IFMDKSGLKS EPPFKITFYV AIASTVGMFI YGMLTKELVL SSLTHKAWGL SAIFAFLCTV VALSLLQVCI KYIGASEAAV ISTFEPITSV IFGAILLGEE ITLMKIIACS LIFAGVLILS FAKEKTKSNI KIKESVTN
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