| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0729 |
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| Symbol | |
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| ID | 4206035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 852216 |
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| End bp | 855614 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565289 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | YP_698055 |
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| Protein GI | 110803863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAT ATAAAAAGTC CATAGTAAGA GAAATTCTAT CATCAAAAGC CAGATTCTTT
TCTATAATGG TAATTATATT TTTAGGGGTT GCCTTTTACT CTGGAATAAA ATCAGCAGGC
CCAGATATGA ATAAAACCAT AAATAAGTTT TATAATAGTG AAAATCTTAT GGATAGCAAG
GTTATTTCAA CTTTAGGATT AAGTGATAAA GATTTGGATT TACTTAAGAA TAATCCTAAG
ATTTTAGCTT ATTATGGTAC TCATAGTATA GATGCAAACT TAACTAATAT GAGCAATGTG
GTTAAGTTTA TGGAGTATGA TGGAAAAAAT AATATAAATA ATTTAGTTGT ATTAGAAGGT
AAGTTACCAG AAAAAAGTGG TGAAATAGCT TTAGATGAAA GAGCTTTTAA GCTTAATAAA
AACTTAAAAA TCGGTGATGA TTTTATAATT GAGACTGATG AAAATACAAT GAAGAACTTT
AAAGAAAATA AGTTTAAAAT CGTTGGGATT GTAAAAAATC CAATGTATAT TGAAAAAGAG
TCAAGAGGAT CAACTACTGT TGGAAAAGGA ACTATTGATT ACTTTGGCAT ATTAAATAGC
AATGATATAA ATATGGATGC TTACACTGAA ATATATGTAA GATTTAAGAA TATACAAGGT
CTTGATGCTT ATGGAGATGA GTACAAGGAA TTAATGGAAG AGAATAATAA ATATCTTGAA
GATTTATATT CTAATAGAGA AGTAGAAAGA GTTGAAGAGA TAAAAAGGGA AGCCAAAAAA
GAGTTTAATA AGGCTTATGA AGAGTTAAAT GAAAATGAAA AGTTACTTTT AGATAAGGAA
AAAGAATTAC AAGAGGGAAA AGCACAATTA GCAGAAGGGA AAAAACAATA TAGTGATAAA
AAGCTAGAGT TTGAAAAGGG AATTAAAGAA GGAGAAGCCA ATATTCTAAA GGGTGAAAAG
CAATTAGAAG AAGGGCAGGC TGAAATTAAG AATCAAAAGT CTAATATGGA AGAGGGAGAG
ATAAAGTTAA ATAATGCAAA AACTACCCTT CATAATAGTA GACAAGAATT TTTAAATCAG
GGAATTAATC CAGATGAAAG CACAAATGGA TTAAAGGAGA AAATAGAAAA TCTAAAAAGT
TTATCTAAAA CAATGACTTC CCTATCTAAT GATATAAAAA CTACAGTTAA TAATCTTTCA
GAAAATGAAA AAATACCAGC TGAAAAGATT CAGTACTGGA AAGGTATAGT AGCTAACTTA
GGATTAAATG AGTTAAATGG AGCGATAGAG GAATTAGAAA AAAATCCAGA AAATAAAAAT
ATTGCTTTAG GACTTTCTGA TTCTCTAGAT AAAAGCGTTA ACTCTATTAA TGATAATACT
TCAAAATTAC AAGTATTGTT AGATGGAATA ACTAAATATC AAGAAGGAAA AAATCAGTAT
GAAACTCAAG TGGCTTTATT TAATGAAGGT AAAAGTAAAC TTTGTGAAGC TGAAAAACAA
TTAGAAAAGG GTAAGGTAGA ATTAGCTGAG GGAAAAAAAT CTCTTGAAGA AGGAAAAGCT
AAAGGAGAAA GAGAACTTCA AAAGGCAAAG AAGAAGTTAG ATGAATCAGA AGAAAAGTTA
AAAGAGGGCC AAAAAGCAAT AGAAGAAAAT AAGGAAAAAC TAGCAGAAGG AAGAAAAGAA
ATTGAAGAAA AAGAAAAATC AACTTTAAAT GATTTGAATG AATGTAATTA CTACGTATTT
GATAGAACTG ATAATCCAGG ATATTCAGGA TACAAGGATT CTATTAATAG TTTAGATAGC
ATTGCATCAG TATTACCTGT GTTTTTCTTT ATAGTGGCAG TCTTAATTTG TTTAACAACA
ATGACAAGAA TGGTAGAGGA GAAGAGAATA GAAATAGGTA CTATGAAGGC TTTAGGATAT
GGAGATTTTG AAATTTCCTT AAAGTTTGTA ATATATGCAG CCTTAGCAAG TATTTTAGGA
TGTCTACTTG GAATATTAGT TGGAAGCAAC ATTCTTCCTA AAATAATAAG CAATGCTTAT
AAAAGTGTAT ATGCTCTTCC TAGTATAGAT ACTTATTACT ATGCATCTTA TATAATTCAA
GCTTTAGTAA TATCCATATT ATGTACAGTT GGAGCAGCCT TATTTGTTGT AAGAGTTGAG
CTTAAAAATA AGCTATCAAA TCTTATGAGA CCAAAGGCTC CAAAACTAGG TAAAAAGATA
TTATTAGAAA GAATTACACC AATTTGGAAA AGATTAAACT TCAATCAAAA GGTAACATTT
AGAAATATAT TTAGATATAA ACAGCGTATG CTTATGACTA TCTTTGGTAT TGCAGGATGT
ATGGCACTTC TTGTTACTGG TTTTGGACTT AAGGATTCAA ATACTGGAAT GGTTGAAAAG
CAATTTGATA AGTTATGGAA ATATGAAGCT ATGGTAGTCT TTGGAGATAA TCCTACAGAA
GCAGAGATTG AAAAATATAA TGAAACTTTA AAGGAATTAC CTGGATATGA AAATAATTTA
AGAATGCACC AAGAATCAGT AACCTTTAGC AAAGAAGGAA TGAATAAGCA AACAGTTAGT
CTATATGTAC CTGAAAATAA AGATGAGTTA GATAAATTTA TACTTTTAAA TGATAGAACT
TCAGGAGAAA AATATGAGAT TCCAGATGAG GGCGTTGTTA TTAATGAAAA GTTAGGAAAA
CTTTTAGGGG TATCCATTGG AGATACAATA ACCTTTAAGG ATGAAAATAA TAATCCTCAT
GAGGTGAAAG TAAAGGAGAT AGCTGAAAAT TATCTTATGC ATTCAATGTA TATGTCACCA
GAATATTATG AAAAAGTCTT TGGGAAGAAG GCTAATTATA ATACAGATCT TATAAACTTT
GATAAGAGTA AGATCAATGA AGATGAAATA TCCTCAAAAC TTATGAAATG CAAGGACGTT
GTGAATGTAA CAATGACATC ACAAATAGAA AAGACAACTA AAGAGTCAGT GGCTAACATG
AATGTAGTAA TGCTAGTAAT AATATTATCA GCAGGATCAT TAGCTTTTGT AGTTTTATAC
AATCTAAACA ATATAAATGT CTCTGAGCGT ATAAGAGAAC TATCAACCAT AAAAGTTCTT
GGATTCTTTG ATGATGAAGT TACAATGTAT ATATTAAGAG AAAATATAAT CTTAACCTTA
TTAGGAATAT TGGCAGGATC AGTTTTAGGA AAGATTCTAC ATGCCTTTAT AATAAGGACA
TCAGAAACAG ATACTATGAT GATGTATCCT AAGATACATA TATCAAGTTA TATATTCTCA
GCTTTAATAA CTATACTTTT CACAGTAATA GTTATGATAC TTATGCATGT TAAGTTAAGA
AAAGTTAATA TGATTGATGC ATTGAAATCA AATGAATAA
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| Protein sequence | MKAYKKSIVR EILSSKARFF SIMVIIFLGV AFYSGIKSAG PDMNKTINKF YNSENLMDSK
VISTLGLSDK DLDLLKNNPK ILAYYGTHSI DANLTNMSNV VKFMEYDGKN NINNLVVLEG
KLPEKSGEIA LDERAFKLNK NLKIGDDFII ETDENTMKNF KENKFKIVGI VKNPMYIEKE
SRGSTTVGKG TIDYFGILNS NDINMDAYTE IYVRFKNIQG LDAYGDEYKE LMEENNKYLE
DLYSNREVER VEEIKREAKK EFNKAYEELN ENEKLLLDKE KELQEGKAQL AEGKKQYSDK
KLEFEKGIKE GEANILKGEK QLEEGQAEIK NQKSNMEEGE IKLNNAKTTL HNSRQEFLNQ
GINPDESTNG LKEKIENLKS LSKTMTSLSN DIKTTVNNLS ENEKIPAEKI QYWKGIVANL
GLNELNGAIE ELEKNPENKN IALGLSDSLD KSVNSINDNT SKLQVLLDGI TKYQEGKNQY
ETQVALFNEG KSKLCEAEKQ LEKGKVELAE GKKSLEEGKA KGERELQKAK KKLDESEEKL
KEGQKAIEEN KEKLAEGRKE IEEKEKSTLN DLNECNYYVF DRTDNPGYSG YKDSINSLDS
IASVLPVFFF IVAVLICLTT MTRMVEEKRI EIGTMKALGY GDFEISLKFV IYAALASILG
CLLGILVGSN ILPKIISNAY KSVYALPSID TYYYASYIIQ ALVISILCTV GAALFVVRVE
LKNKLSNLMR PKAPKLGKKI LLERITPIWK RLNFNQKVTF RNIFRYKQRM LMTIFGIAGC
MALLVTGFGL KDSNTGMVEK QFDKLWKYEA MVVFGDNPTE AEIEKYNETL KELPGYENNL
RMHQESVTFS KEGMNKQTVS LYVPENKDEL DKFILLNDRT SGEKYEIPDE GVVINEKLGK
LLGVSIGDTI TFKDENNNPH EVKVKEIAEN YLMHSMYMSP EYYEKVFGKK ANYNTDLINF
DKSKINEDEI SSKLMKCKDV VNVTMTSQIE KTTKESVANM NVVMLVIILS AGSLAFVVLY
NLNNINVSER IRELSTIKVL GFFDDEVTMY ILRENIILTL LGILAGSVLG KILHAFIIRT
SETDTMMMYP KIHISSYIFS ALITILFTVI VMILMHVKLR KVNMIDALKS NE
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