Gene CPR_0728 details

Gene Information

• Locus tag: CPR_0728
• ID: 4206084
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 851498
• End bp: 852199
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642565288
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_698054
• Protein GI: 110803834
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATATA TAGATGTAAT AGATGTTCAC AAGAGATATA AAATTGGGGA AAACATAGTT 
GTTGCTAATA ATGGAATTAA TTTTTCTATT GATAAGGGAG AATTTGTTGT TATTTTAGGA 
CCAAGTGGAG CAGGAAAATC AACTACTCTT AATATTTTAG GGGGAATGGA TAGCTGTGAT 
GAAGGTAAAA TAATAATTGA TGAAACTGAT ATATCTAAAT TTAGTAATAG AGAGCTTACT 
AAGTATAGAA GATATGATGT TGGATTTGTA TTTCAGTTTT ATAATTTAGT ACAAAACTTA 
ACTGCAAAGG AAAATGTGGA ACTTGCCACT CAAATTTCAA ATAATGCCTT AGATGTTGAG 
AAAACTTTAG AGTTAGTTGG GCTTGGACAT AGAAAAGATA ACTTCCCAGC ACAATTATCT 
GGTGGAGAAC AACAAAGGGT CTCTATAGCT AGAGCCATTG CAAAAAATCC AAAACTTTTA 
CTTTGTGATG AGCCAACAGG AGCTTTAGAT TATAGTACAG GTAAGCAAAT TTTAAAAATA 
CTTCAAGATA CATGTAGAAA GATAGGAACT ACGGTAATAA TAATAACTCA TAACTCAGCA 
ATAGCACCTA TGGCTGACAA GGTTATTAAG ATTAATGATG CAAAAGTTAG AAGTATTGAG 
ATTAATTCTA ATCCAATCTC AGTTGAAGAA ATAGAGTGGT AG 

 

Protein sequence

MAYIDVIDVH KRYKIGENIV VANNGINFSI DKGEFVVILG PSGAGKSTTL NILGGMDSCD 
EGKIIIDETD ISKFSNRELT KYRRYDVGFV FQFYNLVQNL TAKENVELAT QISNNALDVE 
KTLELVGLGH RKDNFPAQLS GGEQQRVSIA RAIAKNPKLL LCDEPTGALD YSTGKQILKI 
LQDTCRKIGT TVIIITHNSA IAPMADKVIK INDAKVRSIE INSNPISVEE IEW