Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0679 |
Symbol | |
ID | 4205318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 800668 |
End bp | 801822 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565239 |
Product | ISCpe2, transposase orfB |
Protein accession | YP_698005 |
Protein GI | 110803196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATATCCAA CTAAGAAACA AGCCGAGCTA ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAG AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGC TTCTGTTGAA AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAACAG GTGGCAGACC TAAATTTAAG TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTGG TAAAAGCTAA AGGTAATGTA AATATTGAGA TAGTAGGTAA AAGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA AATTCAAGAA ATGTAGATGG AGATATTAAA AGAGTTACTG TGAGCAGAAC ACAATCTGGT AAATATTTTG CATCTATTCT TTGTGATGTA AATATTGAAA AATTACCTAA AATAGATAAA AAAGTTGGTG TAGATGTTGG ACTAAAAACT TTTGCTGTTT GTTCTGATGG ATATGAAGAA GCTAATCCTA AACACTTTAG AAAGGCAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA GCTCGTAAAG AATATAACTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA CATGAAAGGA TAGCAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAT AAACTTGCTA AAGTAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC AAGGCTGAAT TGTATGGTAG AGAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA CTATGTTCTG AATGTGGCTA TAAGAATATA GAAGTTAAAA ATCTAGGTCT AAGAGAATGG GTATGTCCCG AATGTGGAAC ACACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGAAA AAGCTGATAG CTTAA
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Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQASVE NLGAGYDKYY KKTGGRPKFK SKKNEIQSYT TKLVKAKGNV NIEIVGKRIK LPKLGLVKIE NSRNVDGDIK RVTVSRTQSG KYFASILCDV NIEKLPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKAE KRLIKLQRDL ARKEYNSKNY HKNRIMIAKL HERIANQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH KLAKVISEAS WSEFRRMLEY KAELYGREIV IAPPDYASSQ LCSECGYKNI EVKNLGLREW VCPECGTHHQ RDLNASINLK KLIA
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