| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0668 |
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| Symbol | thiC |
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| ID | 4206296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 786586 |
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| End bp | 787896 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565228 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_697995 |
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| Protein GI | 110803617 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATA CAACTCAAAT GGATGCTGCT AAAAAAGGAA TAATAACAAA GGAAATGCAA
GTAGTTGCAG AAAAAGAAGG AATTAATATT GAAACTTTAA TGAATTTAAT GGCTGAAGGA
AAAATTGTAA TACCAGCTAA TAAAAATCAT AAAAGTATAA GTGCAGAGGG TGTTGGACAA
GGATTAAAAA CTAAAATAAA TGTTAACCTA GGAATTTCAA AGGATTGTGC CAATATAGAA
TTAGAGTTAG AAAAAGTTAA AAAAGCAATA GATATGAATG CAGAATCTAT AATGGATTTA
AGTAATTATG GTAAAACTTA TGATTTTAGA AAAAGACTTG TAGAAGTTTC TACGGCTATG
ATAGGAACTG TACCAATGTA TGATGTAGTA GGTTTCTATG ATAAAGAACT TAAAGATATA
ACTGTTGATG AATTTTTTGA TGTTGTAGAA AAACATGCAA AGGATGGAGT TGACTTTGTT
ACTATACATG CTGGATTAAA TAGAGAAACA ATTGAAACTT TTAGAAGAAA TAAAAGACTT
ACTAATATAG TTTCTAGGGG AGGATCTCTT CTTTTTGCAT GGATGGAATT AAATAATAGA
GAAAATCCTT TTTATGAATA TTTTGATAGA TTATTAGATA TATGTGAAAA GTATGATTTA
ACTTTAAGTT TAGGGGATGC TTGTAGACCA GGTTCAATAG CTGATGCAAC TGATGCTGTA
CAAATCAAAG AATTAATTAC CCTTGGAGAA CTAACAAAAA GAGCTTGGGA AAGAAATGTA
CAAGTAATAA TAGAGGGACC AGGTCATATG GCAATGAATG AAATTGAAGC TAATGTTTTA
TTAGAGAAAA AATTATGCCA TGGAGCACCA TTTTATGTTT TAGGACCAAT AGTAACTGAT
ATTGCACCAG GATATGATCA TATAACAAGT GCTATAGGAG GGGCTATGGC GGCTTCTTAT
GGAGCAGATT TTCTTTGTTA TGTAACACCA GCAGAACATT TAAGACTTCC TAATTTAGAG
GATGTAAGGG AAGGAATAGT TGCCACAAAG ATAGCGGCTC ATGCAGCTGA TATAGCAAAA
GGAATTTCAG GGGCAAGAGA TATAGATAAT AAAATGAGTG ATGCTAGGAA AAGACTAGAT
TGGGACGAGA TGTTTTCTTT AGCAATAGAT AGTGAAAAAG CAATTAGATA CAGAAAAGAA
TCTACTCCTG AACATAAAGA TAGTTGTACA ATGTGTGGAA AAATGTGCTC TATAAGAAAT
ATGAATAAGA TTCTAGAAGG GAAGGATATA AACCTTTTAA GAGAAGACTA A
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| Protein sequence | MNYTTQMDAA KKGIITKEMQ VVAEKEGINI ETLMNLMAEG KIVIPANKNH KSISAEGVGQ
GLKTKINVNL GISKDCANIE LELEKVKKAI DMNAESIMDL SNYGKTYDFR KRLVEVSTAM
IGTVPMYDVV GFYDKELKDI TVDEFFDVVE KHAKDGVDFV TIHAGLNRET IETFRRNKRL
TNIVSRGGSL LFAWMELNNR ENPFYEYFDR LLDICEKYDL TLSLGDACRP GSIADATDAV
QIKELITLGE LTKRAWERNV QVIIEGPGHM AMNEIEANVL LEKKLCHGAP FYVLGPIVTD
IAPGYDHITS AIGGAMAASY GADFLCYVTP AEHLRLPNLE DVREGIVATK IAAHAADIAK
GISGARDIDN KMSDARKRLD WDEMFSLAID SEKAIRYRKE STPEHKDSCT MCGKMCSIRN
MNKILEGKDI NLLRED
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