Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0661 |
Symbol | |
ID | 4204857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 780153 |
End bp | 780713 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565221 |
Product | NUDIX domain-containing protein |
Protein accession | YP_697988 |
Protein GI | 110802914 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00385243 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTATA TTGAAGATAT AAAAAATTAT ATTCCTTTTA ACGAACAGGA AGAAATGGAT AAAGAACTAT TTTTAAGATG CTTAAATGAT TTTCATGATA TTTTAACAAG AGATAATAAA ATTGCTCATT TAACTAGCTC AGCTTTTGCT GTAAATAAAG AAAGAAATAA ATTTTTAATG ATTCATCATA ACATATATAA TTCTTGGGCA TGGACTGGTG GTCATTCAGA TAATGAAAAA GATCAACTGA AAGTTGCAAT GAAGGAATTA AAAGAAGAAA CTGGAGTTAA AAATCCTACT CCTCTTTTAG ATAAAGCTTT TGCATTAGAT GTGTTAACAG TAAATGGCCA CATAAAAAGA GGAAAATATG TTTCATCCCA TCTTCATTTA AATCTTACTT ATCTAATAGA ATGCTCAGAA GAGGAAACTC TTATGCTTAA AGAGGATGAA AATAGCGGTG TTATATGGAT TCCTTTTAAT GAAATAAGTA AATATTGCAG TGAGCCTCAT ATGATTCCAA TTTATGAAAA ATTAATAGAA AAACTAAAAT CTCTAAAATA A
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Protein sequence | MNYIEDIKNY IPFNEQEEMD KELFLRCLND FHDILTRDNK IAHLTSSAFA VNKERNKFLM IHHNIYNSWA WTGGHSDNEK DQLKVAMKEL KEETGVKNPT PLLDKAFALD VLTVNGHIKR GKYVSSHLHL NLTYLIECSE EETLMLKEDE NSGVIWIPFN EISKYCSEPH MIPIYEKLIE KLKSLK
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