| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0656 |
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| Symbol | |
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| ID | 4204452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 774733 |
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| End bp | 775845 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565216 |
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| Product | bacteriocin ABC transporter, putative |
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| Protein accession | YP_697983 |
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| Protein GI | 110801526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.2243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAT ATAGTATAAA TGAACTAACT CACAGTAAAA TTTTATATGA TAAAAATCCA
CCTAAATTTA TGATGTATAT AATAATTATA GTGTTAGCTT TATTAGTAGC GTTTATAGTT
TGGTCAACTA AATCAGTAAA GACTTATATA ATAAAAGGAC AAGGTATAGT TACTACAGAT
ACAAAATCAA ATGTAATGAC TAAAATGTCA GGTGAAATTA CAGATGTTTT TATTGAAGAA
GGAAAAGATG TTAATGAAGG AGATACTTTA ATAAGTTTAA ATCCTTTAGA ATCCAACTTA
CAATTAGGTC AAATTCAAGC TCAGATTCAA GTTATTAATA ATAGAATAAC TTTACTTGAT
AGGGCAGAGA AAGATGCTAC TAATGGTAGA AATACTTTCA ATAAAAATAA TTCTGATGAA
GTAGAGTTTT ATAATAAATT AGCTAATTTA AATACAAAAA GAAAAGAATT TATTGTAGAT
AAAGAAGAAG CTAAAAAACA AGGAGCTACG GATGAACAGA TAGAAAAATA TGAGAAATCA
CAAAAAAATA AAGATGATGT GACAAGATAT GAGGGGATTC TTCAATTTAC AAATGAAAAA
AAGCAATTAG AGTTTGAAAA AAGTAAATTA GAAGCACAAA AAAAATCATT AGAAGAAGCT
GCTGAAGAGT TTAAAATTGT AGCACCTAAA AGTGGAAAGT TACATTTAAA TGTACCATTA
AATAAAGGAA TGGTACTTCA AGCAGGTAGT TTAATAGGAA CTTTAACTAA TAAAGAAGAA
AAGATTATTA TAGAATCTTT AATTCCATCA AATGAAAGAC CAAGAATACA TATAGGTGAT
GAAGTGTCCC TAGCGGTATT AGGTTTAAGT CAATCAGAAT ATGGAACTAT AGAAGGACAA
GTTTCAAGTA TTGATGAAGA TGCTACTATA GATAATGAAA AAGGAAATGT ATTTTTCAAA
ATAAAGATAG AACCTCAAAA AACATACCTT ACAGACACAA AAGGTGAGAA AGTAAATTTA
ACTTTGGGTA TGCTTACAGA AACAAGGGTT AAATACGAAA AAATAACATA TATGAAATAC
TTCTTAGACC AACTAGGAAT AAAGATTAAC TAG
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| Protein sequence | MKIYSINELT HSKILYDKNP PKFMMYIIII VLALLVAFIV WSTKSVKTYI IKGQGIVTTD
TKSNVMTKMS GEITDVFIEE GKDVNEGDTL ISLNPLESNL QLGQIQAQIQ VINNRITLLD
RAEKDATNGR NTFNKNNSDE VEFYNKLANL NTKRKEFIVD KEEAKKQGAT DEQIEKYEKS
QKNKDDVTRY EGILQFTNEK KQLEFEKSKL EAQKKSLEEA AEEFKIVAPK SGKLHLNVPL
NKGMVLQAGS LIGTLTNKEE KIIIESLIPS NERPRIHIGD EVSLAVLGLS QSEYGTIEGQ
VSSIDEDATI DNEKGNVFFK IKIEPQKTYL TDTKGEKVNL TLGMLTETRV KYEKITYMKY
FLDQLGIKIN
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