| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0621 |
|---|
| Symbol | |
|---|
| ID | 4204899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 740845 |
|---|
| End bp | 741636 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565181 |
|---|
| Product | relA/spoT family protein |
|---|
| Protein accession | YP_697948 |
|---|
| Protein GI | 110801948 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000073544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAC AAAATTGGAA AGACTTTTTA ACTCCTTATG ATCAAGCAGT AAGTGAATTA
AAGGTAAAGT TAAGAAGTAT TAGAAAAGAA TTTAGAAGAA AAAATGAATA TTCTCCAATC
GAGTTTGTAA CTGGAAGGGT GAAAGAGGTA TCTAGTATAT TAGAAAAGGC AAATAAATAT
AGTATTCCTG TAGATAGAAT CCAATATGAG ATGGAGGATA TTGCAGGTAT AAGAATAATG
TGCCAATTTG TTGATGATAT AGATACTGTT GTCAATATTA TAAGGAATAG AAAAGATATG
CAAGTTCTTT ATGAAAAGGA CTATGTTAGC AATGTAAAAC CAAGTGGCTA TAGAAGCTAT
CATGTGGTTA TAAGATATCC TATAAATATG GCAGATGGAC AAAAAGATAT ACTTGCTGAA
TTCCAAATAA GAACTTTAGC AATGAATTTC TGGGCTACAA TAGAACATTC TTTAAATTAT
AAGTATAAAA AGAATCTGCC AAAGGACATA CAATTTAAAT TAAAACGTGC AGCTGATGCA
GCATTTACTT TAGATGAAGA AATGCTTGAA ATAAAAGATG AAATAAAGGA TGCTCAAACT
TTATTTGAGG TTAAATCAGA TATTATAAGT ACTATAATGA ATAGTATATT AAATCTTATT
TCAATAGGAA AAGTGGCTGA GGCTTCTAGA TATCAAATAA GTTTAAATAA ACTTATTGAA
GAGGGAGAAG TTTGGGAACT TAATAATTTA TTAAGAGCTG TCCAAAGAGA CATAGATAAG
TATAATGTAT AA
|
|---|
| Protein sequence | MAIQNWKDFL TPYDQAVSEL KVKLRSIRKE FRRKNEYSPI EFVTGRVKEV SSILEKANKY
SIPVDRIQYE MEDIAGIRIM CQFVDDIDTV VNIIRNRKDM QVLYEKDYVS NVKPSGYRSY
HVVIRYPINM ADGQKDILAE FQIRTLAMNF WATIEHSLNY KYKKNLPKDI QFKLKRAADA
AFTLDEEMLE IKDEIKDAQT LFEVKSDIIS TIMNSILNLI SIGKVAEASR YQISLNKLIE
EGEVWELNNL LRAVQRDIDK YNV
|
|---|
| |