| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0619 |
|---|
| Symbol | tyrS |
|---|
| ID | 4205304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 738558 |
|---|
| End bp | 739778 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642565179 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_697946 |
|---|
| Protein GI | 110802117 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.171861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATG TATTAGATAC GTTAATGGAA CGTGGGTACA TAAAACAGTT TACTCATGAA
GCTGAAACAA GAGAACTTTT AGAGAAGGAA AAAGTTACTT TTTATATAGG ATTTGACCCA
ACAGCTGATA GTTTACATGT AGGACACTTC ATTGCAATGA TGTTTATGGC TCATATGCAA
AAGGCTGGAC ATAGACCGAT AGCTTTAATT GGTGGAGGTA CAGCTACAAT TGGAGATCCA
AGTGGTAAGA CTGATATGAG AAAGATGATG ACAAATGAGA CTATAGCTCA TAATGTTGCT
TGTATCAAAA AGCAAATGGA GAAATTCATA GACTTTTCAG ATGATAAAGC TATACTTGTT
AACAATGCTG ATTGGTTATT AAATCAAAAC TATGTTGAAT TCTTAAGAGA GGTTGGAGTT
CACTTCTCAG TTAATAGAAT GCTTTCAGCA GAATGTTTTA AACAAAGACT TGAAAGAGGT
CTTTCATTCT TAGAATTTAA CTACATGTTA ATGCAAGGAT ATGACTTCTA TGTTTTAAAT
AAAAAATATA ACTGTAAAAT GGAGCTAGGT GGAGATGACC AATGGTCAAA CATGATAGCT
GGTGTTGAAC TTGTAAGAAA GAAATCACAA AAAAGTGCAT ATGCTATGAC TTGTACATTA
TTAACTAACT CAGAAGGACA AAAAATGGGT AAAACAGTTA ATGGTGCATT ATGGTTAGAT
CCAGAGAAAA CTTCTCCATA CGAGTTCTAC CAATACTGGA GAAATGTTAA TGATGCAGAT
GTTGAAAAAT GCTTAAAACT ATTAACATTT ATTCCTATGG ATGAAGTTAG AAGACTTTCA
AGTTTAGAAG GTTCTCAAAT AAATGAAGCT AAAAAAGTTT TAGCATTTGA GGTAACTAAA
CTTGTACATG GTGAAGAGGA AGCTACAAAG GCAAAGCAAG CTGCTGAAGC TTTATTTGGA
AAAGGTGGAG ACATGAGTAA TGTTCCAACT TATGAAATGG GAAAAGATAA GTTAGGTTCA
GAACTTTTAG ATATTTTAGT TGAAGCTGAA ATAGTTCCAT CAAAAGCTGA AGGAAAAAGA
CTTGTTAAGC AAGGTGGATT ATCATTAAAT GGAGAAAAAG TTGCTGATTT TAAAAAGACA
TTAGAAGAAG CTGACTTTGA AAATGGTGAA GTTTTAATTA AAAGAGGTAA GAAAAACTAC
AATAAAATAG TTTTAGCATA A
|
|---|
| Protein sequence | MANVLDTLME RGYIKQFTHE AETRELLEKE KVTFYIGFDP TADSLHVGHF IAMMFMAHMQ
KAGHRPIALI GGGTATIGDP SGKTDMRKMM TNETIAHNVA CIKKQMEKFI DFSDDKAILV
NNADWLLNQN YVEFLREVGV HFSVNRMLSA ECFKQRLERG LSFLEFNYML MQGYDFYVLN
KKYNCKMELG GDDQWSNMIA GVELVRKKSQ KSAYAMTCTL LTNSEGQKMG KTVNGALWLD
PEKTSPYEFY QYWRNVNDAD VEKCLKLLTF IPMDEVRRLS SLEGSQINEA KKVLAFEVTK
LVHGEEEATK AKQAAEALFG KGGDMSNVPT YEMGKDKLGS ELLDILVEAE IVPSKAEGKR
LVKQGGLSLN GEKVADFKKT LEEADFENGE VLIKRGKKNY NKIVLA
|
|---|
| |