| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0616 |
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| Symbol | |
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| ID | 4204594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 735374 |
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| End bp | 736498 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642565176 |
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| Product | GerABKA family spore germination protein |
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| Protein accession | YP_697943 |
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| Protein GI | 110802403 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.693765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTAA AGAAAGTTAT AGCTAGTTTA CTAAGCGTAA TAATTATGTC AATCATGTTT
ATTGGTTGTT ATAATTATAA GGATATAAAT AAAGTTACTT TTGTAACAAG CTTAATATTT
GATGAAAATG AAGTGGGAAA TATAGACATA TATTTAGATT GTGTAAAACC TTATAGAAGT
TCAAATGAAA GTTCTGATAA AGGAAGAAGA GTATTATATA AAGGTACTGG AAAAACAGTT
TTAGAAGCAA TTAAGGATAT AAATATGTAT TCTAGTAGTA AGTTAGACTT TACTCAATGC
AAGGGATATA TATTTACAGA GAAGGCTGCT AAAAATGGAA TAAGAAAGTA CACAGATATT
ATAAATAAAA ATCAAGAATT CATGATTAGA CCTTATATGT TTGTTTTATT TGGTTCTCCA
GAAGAACTTT TAAATGATGT AACTGTTGAT GAAGAGTATT TAGGTGTTTT TATTGATGAT
TTAGTTCAAA GGATGAATAA AAGTCCTAGA GTTATAGCTA TTGATGCCAA TGATTATTTA
GAGCTTAGAA CTAATTATGG AAATCTATTA GTTTTAGGAG CATTAAGTAT AAGAGATGAT
ATGGAAGAAA AAAGATTAGA GTTAAGCGGA GGAGCTTTGT TAAAAAATGA GGTCTTAGTG
AGAAGGATAA CTGCAGAGGA AGGTATGAGC TATAATCTTT TAATGGGAGA TTTAAAAAGA
GGAACTCTAG AAGTTATGAA CCCTCAAGAC CCTAATACTT TTATAACATT AGATATATCT
AATGCAAAAA CAAAGACATC AATAAGTTAT GATGGAGAAA ATATAACTCT TTATAAGGAT
ATAAAGGTTA AATGTTTAAT TGGTGAATCA CAATCAAGAC TCATTGTGGA TGAAAAACTT
TTAAATCTTT TAGAGTTAGA AGAAGAGGCA GTAATAAAAC AATACTTAGA ACTTTTCTTT
GAAAGCTTTA AAGAGAGTGA TATAGACATT GTTAATGTTG GCAATCTTTT TTATAGAAAA
TATCCAGATG AGGTATTAGA AAAGGATCCT ATAAGCATTA CAAATTTAAA GATTAATGTT
GATGTTGAAA TTAATGGCAC AACAATTACA GGAAATACAC TTTAA
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| Protein sequence | MNLKKVIASL LSVIIMSIMF IGCYNYKDIN KVTFVTSLIF DENEVGNIDI YLDCVKPYRS
SNESSDKGRR VLYKGTGKTV LEAIKDINMY SSSKLDFTQC KGYIFTEKAA KNGIRKYTDI
INKNQEFMIR PYMFVLFGSP EELLNDVTVD EEYLGVFIDD LVQRMNKSPR VIAIDANDYL
ELRTNYGNLL VLGALSIRDD MEEKRLELSG GALLKNEVLV RRITAEEGMS YNLLMGDLKR
GTLEVMNPQD PNTFITLDIS NAKTKTSISY DGENITLYKD IKVKCLIGES QSRLIVDEKL
LNLLELEEEA VIKQYLELFF ESFKESDIDI VNVGNLFYRK YPDEVLEKDP ISITNLKINV
DVEINGTTIT GNTL
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